7jtl
From Proteopedia
(Difference between revisions)
Line 3: | Line 3: | ||
<StructureSection load='7jtl' size='340' side='right'caption='[[7jtl]], [[Resolution|resolution]] 2.04Å' scene=''> | <StructureSection load='7jtl' size='340' side='right'caption='[[7jtl]], [[Resolution|resolution]] 2.04Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'> | + | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7JTL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7JTL FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.04Å</td></tr> |
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7jtl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7jtl OCA], [https://pdbe.org/7jtl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7jtl RCSB], [https://www.ebi.ac.uk/pdbsum/7jtl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7jtl ProSAT]</span></td></tr> | ||
</table> | </table> | ||
- | == Function == | ||
- | [[http://www.uniprot.org/uniprot/NS8_SARS2 NS8_SARS2]] May play a role in host-virus interaction. | ||
- | <div style="background-color:#fffaf0;"> | ||
- | == Publication Abstract from PubMed == | ||
- | The molecular basis for the severity and rapid spread of the COVID-19 disease caused by SARS-CoV-2 is largely unknown. ORF8 is a rapidly evolving accessory protein that has been proposed to interfere with immune responses. The crystal structure of SARS-CoV-2 ORF8 was determined at 2.04 A resolution by x-ray crystallography. The structure reveals a ~60 residue core similar to SARS-CoV ORF7a with the addition of two dimerization interfaces unique to SARS-CoV-2 ORF8. A covalent disulfide-linked dimer is formed through an N-terminal sequence specific to SARS-CoV-2, while a separate non-covalent interface is formed by another SARS-CoV-2-specific sequence, 73 YIDI 76 . Together the presence of these interfaces shows how SARS-CoV-2 ORF8 can form unique large-scale assemblies not possible for SARS-CoV, potentially mediating unique immune suppression and evasion activities. | ||
- | |||
- | Structure of SARS-CoV-2 ORF8, a rapidly evolving coronavirus protein implicated in immune evasion.,Flower TG, Buffalo CZ, Hooy RM, Allaire M, Ren X, Hurley JH bioRxiv. 2020 Aug 27. doi: 10.1101/2020.08.27.270637. PMID:32869027<ref>PMID:32869027</ref> | ||
- | |||
- | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
- | </div> | ||
- | <div class="pdbe-citations 7jtl" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
*[[Nonstructural protein 3D structures|Nonstructural protein 3D structures]] | *[[Nonstructural protein 3D structures|Nonstructural protein 3D structures]] | ||
- | == References == | ||
- | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: 2019-ncov]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Allaire | + | [[Category: Allaire M]] |
- | [[Category: Buffalo | + | [[Category: Buffalo CZ]] |
- | [[Category: Flower | + | [[Category: Flower TG]] |
- | [[Category: Hooy | + | [[Category: Hooy RM]] |
- | [[Category: Hurley | + | [[Category: Hurley JH]] |
- | [[Category: Ren | + | [[Category: Ren X]] |
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + |
Current revision
Structure of SARS-CoV-2 ORF8 accessory protein
|
Categories: Large Structures | Allaire M | Buffalo CZ | Flower TG | Hooy RM | Hurley JH | Ren X