5tr7

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Current revision (13:09, 4 October 2023) (edit) (undo)
 
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<StructureSection load='5tr7' size='340' side='right'caption='[[5tr7]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
<StructureSection load='5tr7' size='340' side='right'caption='[[5tr7]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5tr7]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibch Vibch]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5TR7 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5TR7 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5tr7]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 Vibrio cholerae O1 biovar El Tor str. N16961]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5TR7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5TR7 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NO2:NITRITE+ION'>NO2</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">VC0947 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243277 VIBCH])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NO2:NITRITE+ION'>NO2</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Serine-type_D-Ala-D-Ala_carboxypeptidase Serine-type D-Ala-D-Ala carboxypeptidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.16.4 3.4.16.4] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5tr7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5tr7 OCA], [https://pdbe.org/5tr7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5tr7 RCSB], [https://www.ebi.ac.uk/pdbsum/5tr7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5tr7 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5tr7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5tr7 OCA], [http://pdbe.org/5tr7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5tr7 RCSB], [http://www.ebi.ac.uk/pdbsum/5tr7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5tr7 ProSAT]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q9KTF5_VIBCH Q9KTF5_VIBCH] Removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors.[ARBA:ARBA00003217]
==See Also==
==See Also==
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Serine-type D-Ala-D-Ala carboxypeptidase]]
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[[Category: Vibrio cholerae O1 biovar El Tor str. N16961]]
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[[Category: Vibch]]
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[[Category: Anderson WF]]
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[[Category: Anderson, W F]]
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[[Category: Dubrovska I]]
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[[Category: Structural genomic]]
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[[Category: Filippova EV]]
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[[Category: Dubrovska, I]]
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[[Category: Kiryukhina O]]
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[[Category: Filippova, E V]]
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[[Category: Minasov G]]
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[[Category: Kiryukhina, O]]
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[[Category: Shatsman S]]
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[[Category: Minasov, G]]
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[[Category: Shuvalova L]]
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[[Category: Shatsman, S]]
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[[Category: Shuvalova, L]]
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[[Category: Csgid]]
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[[Category: Pbp5]]
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[[Category: Penicil-binding protein]]
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[[Category: Penicillin-binding protein]]
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[[Category: Transferase]]
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Current revision

Crystal structure of a putative D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae O1 biovar eltor str. N16961

PDB ID 5tr7

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