5trd

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Current revision (13:09, 4 October 2023) (edit) (undo)
 
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<StructureSection load='5trd' size='340' side='right'caption='[[5trd]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
<StructureSection load='5trd' size='340' side='right'caption='[[5trd]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5trd]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Theac Theac]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5TRD OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5TRD FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5trd]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermoplasma_acidophilum Thermoplasma acidophilum] and [https://en.wikipedia.org/wiki/Thermoplasma_acidophilum_DSM_1728 Thermoplasma acidophilum DSM 1728]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5TRD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5TRD FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CTP:CYTIDINE-5-TRIPHOSPHATE'>CTP</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ribK, Ta1064 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=273075 THEAC])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CTP:CYTIDINE-5-TRIPHOSPHATE'>CTP</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/CTP-dependent_riboflavin_kinase CTP-dependent riboflavin kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.161 2.7.1.161] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5trd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5trd OCA], [https://pdbe.org/5trd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5trd RCSB], [https://www.ebi.ac.uk/pdbsum/5trd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5trd ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5trd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5trd OCA], [http://pdbe.org/5trd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5trd RCSB], [http://www.ebi.ac.uk/pdbsum/5trd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5trd ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/RIFK_THEAC RIFK_THEAC]] Catalyzes the CTP-dependent phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN).
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[https://www.uniprot.org/uniprot/RIFK_THEAC RIFK_THEAC] Catalyzes the CTP-dependent phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN).
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: CTP-dependent riboflavin kinase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Theac]]
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[[Category: Thermoplasma acidophilum]]
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[[Category: Almo, S C]]
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[[Category: Thermoplasma acidophilum DSM 1728]]
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[[Category: Li, X]]
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[[Category: Almo SC]]
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[[Category: Osterman, A L]]
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[[Category: Li X]]
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[[Category: Rodionov, D A]]
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[[Category: Osterman AL]]
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[[Category: Rodionova, I A]]
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[[Category: Rodionov DA]]
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[[Category: Vetting, M W]]
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[[Category: Rodionova IA]]
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[[Category: Marr type regulatory domain]]
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[[Category: Vetting MW]]
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[[Category: Ribflavin kinase]]
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[[Category: Transferase-dna complex]]
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[[Category: Winged-helix-turn-helix domain]]
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Current revision

Structure of RbkR (Riboflavin Kinase) from Thermoplasma acidophilum determined in complex with CTP and its cognate DNA operator

PDB ID 5trd

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OCA

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