This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5u4n

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:20, 4 October 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5u4n' size='340' side='right'caption='[[5u4n]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
<StructureSection load='5u4n' size='340' side='right'caption='[[5u4n]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5u4n]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"diplococcus_gonorrhoeae"_(zopf_1885)_lehmann_and_neumann_1896 "diplococcus gonorrhoeae" (zopf 1885) lehmann and neumann 1896]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5U4N OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5U4N FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5u4n]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Neisseria_gonorrhoeae Neisseria gonorrhoeae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5U4N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5U4N FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">fda, WHOF_00031C, WHOF_00393, WHOG_00032C, WHOG_01091, WHOK_00031C, WHOK_01288, WHOL_00032C, WHOL_00481, WHOM_00032C, WHOM_00338, WHON_00032C, WHON_00415, WHOO_00031C, WHOO_00479, WHOP_00030C, WHOP_00448, WHOU_00032C, WHOU_01170, WHOV_00032C, WHOV_01444, WHOW_00031C, WHOW_01140, WHOX_00032C, WHOX_00360, WHOY_00032C, WHOY_00387, WHOZ_00031C, WHOZ_00311 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=485 "Diplococcus gonorrhoeae" (Zopf 1885) Lehmann and Neumann 1896])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Fructose-bisphosphate_aldolase Fructose-bisphosphate aldolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.2.13 4.1.2.13] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5u4n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5u4n OCA], [https://pdbe.org/5u4n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5u4n RCSB], [https://www.ebi.ac.uk/pdbsum/5u4n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5u4n ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5u4n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5u4n OCA], [http://pdbe.org/5u4n PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5u4n RCSB], [http://www.ebi.ac.uk/pdbsum/5u4n PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5u4n ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q5FAI4_NEIG1 Q5FAI4_NEIG1] Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.[ARBA:ARBA00002181][RuleBase:RU365019]
==See Also==
==See Also==
Line 14: Line 15:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Fructose-bisphosphate aldolase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Structural genomic]]
+
[[Category: Neisseria gonorrhoeae]]
-
[[Category: Fructose]]
+
-
[[Category: Lyase]]
+
-
[[Category: Phosphate]]
+
-
[[Category: Ssgcid]]
+

Current revision

Crystal structure of a fructose-bisphosphate aldolase from Neisseria gonorrhoeae

PDB ID 5u4n

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools