5vex

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:47, 4 October 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5vex' size='340' side='right'caption='[[5vex]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
<StructureSection load='5vex' size='340' side='right'caption='[[5vex]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5vex]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5VEX OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5VEX FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5vex]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_T4 Escherichia virus T4] and [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5VEX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5VEX FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=97V:4-{[(4-CYCLOHEXYLPHENYL){[3-(METHYLSULFONYL)PHENYL]CARBAMOYL}AMINO]METHYL}-N-(1H-TETRAZOL-5-YL)BENZAMIDE'>97V</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CSD:3-SULFINOALANINE'>CSD</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=97V:4-{[(4-CYCLOHEXYLPHENYL){[3-(METHYLSULFONYL)PHENYL]CARBAMOYL}AMINO]METHYL}-N-(1H-TETRAZOL-5-YL)BENZAMIDE'>97V</scene>, <scene name='pdbligand=CSD:3-SULFINOALANINE'>CSD</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5vew|5vew]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5vex FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5vex OCA], [https://pdbe.org/5vex PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5vex RCSB], [https://www.ebi.ac.uk/pdbsum/5vex PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5vex ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5vex FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5vex OCA], [http://pdbe.org/5vex PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5vex RCSB], [http://www.ebi.ac.uk/pdbsum/5vex PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5vex ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/GLP1R_HUMAN GLP1R_HUMAN]] This is a receptor for glucagon-like peptide 1. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.
+
[https://www.uniprot.org/uniprot/GLP1R_HUMAN GLP1R_HUMAN] This is a receptor for glucagon-like peptide 1. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.[https://www.uniprot.org/uniprot/ENLYS_BPT4 ENLYS_BPT4] Endolysin with lysozyme activity that degrades host peptidoglycans and participates with the holin and spanin proteins in the sequential events which lead to the programmed host cell lysis releasing the mature viral particles. Once the holin has permeabilized the host cell membrane, the endolysin can reach the periplasm and break down the peptidoglycan layer.<ref>PMID:22389108</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 23: Line 21:
==See Also==
==See Also==
-
*[[Glucagon-like peptide 1 receptor|Glucagon-like peptide 1 receptor]]
+
*[[Glucagon-like peptide receptor 3D structures|Glucagon-like peptide receptor 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Escherichia virus T4]]
 +
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Lysozyme]]
+
[[Category: Cai X]]
-
[[Category: Cai, X]]
+
[[Category: Dai A]]
-
[[Category: Dai, A]]
+
[[Category: Graaf CD]]
-
[[Category: Graaf, C D]]
+
[[Category: Han GW]]
-
[[Category: Han, G W]]
+
[[Category: Hanson MA]]
-
[[Category: Hanson, M A]]
+
[[Category: Jiang S]]
-
[[Category: Jiang, S]]
+
[[Category: Lau J]]
-
[[Category: Lau, J]]
+
[[Category: Lin G]]
-
[[Category: Lin, G]]
+
[[Category: Liu D]]
-
[[Category: Liu, D]]
+
[[Category: Liu K]]
-
[[Category: Liu, K]]
+
[[Category: Liu Z-J]]
-
[[Category: Liu, Z J]]
+
[[Category: Song G]]
-
[[Category: Song, G]]
+
[[Category: Stevens RC]]
-
[[Category: Stevens, R C]]
+
[[Category: Wang M-W]]
-
[[Category: Wang, M W]]
+
[[Category: Wang Y]]
-
[[Category: Wang, Y]]
+
[[Category: Wu B]]
-
[[Category: Wu, B]]
+
[[Category: Wu F]]
-
[[Category: Wu, F]]
+
[[Category: Wu Y]]
-
[[Category: Wu, Y]]
+
[[Category: Yang D]]
-
[[Category: Yang, D]]
+
[[Category: Ye L]]
-
[[Category: Ye, L]]
+
[[Category: Zhao S]]
-
[[Category: Zhao, S]]
+
[[Category: Zhou Q]]
-
[[Category: Zhou, Q]]
+
-
[[Category: 7tm domain]]
+
-
[[Category: Class b]]
+
-
[[Category: Gpcr]]
+
-
[[Category: Signaling protein]]
+
-
[[Category: Treatment of type 2 diabetes]]
+

Current revision

Structure of the human GLP-1 receptor complex with NNC0640

PDB ID 5vex

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools