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5x2o

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Current revision (07:53, 22 November 2023) (edit) (undo)
 
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<StructureSection load='5x2o' size='340' side='right'caption='[[5x2o]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
<StructureSection load='5x2o' size='340' side='right'caption='[[5x2o]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5x2o]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Japanese_killifish Japanese killifish] and [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5X2O OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5X2O FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5x2o]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus] and [https://en.wikipedia.org/wiki/Oryzias_latipes Oryzias latipes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5X2O OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5X2O FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ARG:ARGININE'>ARG</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5x2m|5x2m]], [[5x2n|5x2n]], [[5x2p|5x2p]], [[5x2q|5x2q]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ARG:ARGININE'>ARG</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TAS1R2a ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=8090 Japanese killifish]), TAS1R3 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=8090 Japanese killifish])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5x2o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5x2o OCA], [https://pdbe.org/5x2o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5x2o RCSB], [https://www.ebi.ac.uk/pdbsum/5x2o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5x2o ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5x2o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5x2o OCA], [http://pdbe.org/5x2o PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5x2o RCSB], [http://www.ebi.ac.uk/pdbsum/5x2o PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5x2o ProSAT]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/A0A173M0G2_ORYLA A0A173M0G2_ORYLA]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Japanese killifish]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Lk3 transgenic mice]]
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[[Category: Mus musculus]]
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[[Category: Atsumi, N]]
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[[Category: Oryzias latipes]]
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[[Category: Nuemket, N]]
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[[Category: Atsumi N]]
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[[Category: Yamashita, A]]
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[[Category: Nuemket N]]
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[[Category: Yasui, N]]
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[[Category: Yamashita A]]
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[[Category: Amino acid]]
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[[Category: Yasui N]]
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[[Category: Ligand binding]]
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[[Category: Receptor]]
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[[Category: Signaling protein-immune system complex]]
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[[Category: Venus-flytrap domain]]
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Current revision

Crystal structure of the medaka fish taste receptor T1r2a-T1r3 ligand binding domains in complex with L-arginine

PDB ID 5x2o

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OCA

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