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5xmz

From Proteopedia

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Verticillium effector PevD1

Structural highlights

5xmz is a 1 chain structure with sequence from Verticillium dahliae. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:	X-ray diffraction, Resolution 1.85Å
Ligands:	,
Resources:	FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

PEVD1_VERDA Effector protein (PubMed:21691787, PubMed:24080193, PubMed:24337817). Elicits a hypersensitive response (HR) in tobacco plants (N.tabacum) and cotton (G.hirsutum) (PubMed:21691787, PubMed:24080193, PubMed:24337817). Boosts systemic acquired resistance (SAR) to tobacco mosaic virus (TMV) infection in N.tabacum and to V.dhaliae infection in primed cotton seedlings (PubMed:21691787, PubMed:24080193, PubMed:24337817).^[1] ^[2] ^[3]

Publication Abstract from PubMed

The soil-borne fungal pathogen Verticillium dahliae infects a wide range of dicotyledonous plants including cotton, tobacco, and Arabidopsis. Among the effector proteins secreted by V. dahliae, the 16 kDa PevD1 induces a hypersensitive response in tobacco. Here we report the high-resolution structure of PevD1 with folds resembling a C2 domain-like structure with a calcium ion bound to the C-terminal acidic pocket. A yeast two-hybrid screen, designed to probe for molecular functions of PevD1, identified Arabidopsis asparagine-rich protein (NRP) as the interacting partner of PevD1. Extending the pathway of V. dahliae effects, which include induction of early flowering in cotton and Arabidopsis, NRP was found to interact with cryptochrome 2 (CRY2), leading to increased cytoplasmic accumulation of CRY2 in a blue light-independent manner. Further physiological and genetic evidence suggests that PevD1 indirectly activates CRY2 by antagonizing NRP functions. The promotion of CRY2-mediated flowering by a fungal effector outlines a novel pathway by which an external stimulus is recognized and transferred in changing a developmental program.

The asparagine-rich protein NRP interacts with the Verticillium effector PevD1 and regulates the subcellular localization of cryptochrome 2.,Zhou R, Zhu T, Han L, Liu M, Xu M, Liu Y, Han D, Qiu D, Gong Q, Liu X J Exp Bot. 2017 Jun 15;68(13):3427-3440. doi: 10.1093/jxb/erx192. PMID:28633330^[4]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

↑ Wang B, Yang X, Zeng H, Liu H, Zhou T, Tan B, Yuan J, Guo L, Qiu D. The purification and characterization of a novel hypersensitive-like response-inducing elicitor from Verticillium dahliae that induces resistance responses in tobacco. Appl Microbiol Biotechnol. 2012 Jan;93(1):191-201. doi:, 10.1007/s00253-011-3405-1. Epub 2011 Jun 21. PMID:21691787 doi:http://dx.doi.org/10.1007/s00253-011-3405-1
↑ Liu W, Zeng H, Liu Z, Yang X, Guo L, Qiu D. Mutational analysis of the Verticillium dahliae protein elicitor PevD1 identifies distinctive regions responsible for hypersensitive response and systemic acquired resistance in tobacco. Microbiol Res. 2014 May-Jun;169(5-6):476-82. doi: 10.1016/j.micres.2013.08.001., Epub 2013 Sep 27. PMID:24080193 doi:http://dx.doi.org/10.1016/j.micres.2013.08.001
↑ Bu B, Qiu D, Zeng H, Guo L, Yuan J, Yang X. A fungal protein elicitor PevD1 induces Verticillium wilt resistance in cotton. Plant Cell Rep. 2014 Mar;33(3):461-70. doi: 10.1007/s00299-013-1546-7. Epub 2013 , Dec 12. PMID:24337817 doi:http://dx.doi.org/10.1007/s00299-013-1546-7
↑ Zhou R, Zhu T, Han L, Liu M, Xu M, Liu Y, Han D, Qiu D, Gong Q, Liu X. The asparagine-rich protein NRP interacts with the Verticillium effector PevD1 and regulates the subcellular localization of cryptochrome 2. J Exp Bot. 2017 Jun 15;68(13):3427-3440. doi: 10.1093/jxb/erx192. PMID:28633330 doi:http://dx.doi.org/10.1093/jxb/erx192

1 Structural highlights
2 Function
3 Publication Abstract from PubMed
4 References

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5xmz"

Categories: Large Structures | Verticillium dahliae | Liu X | Zhou R

@@ Line 3: / Line 3: @@
 <StructureSection load='5xmz' size='340' side='right'caption='[[5xmz]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[5xmz]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5XMZ OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5XMZ FirstGlance]. <br>
+<table><tr><td colspan='2'>[[5xmz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Verticillium_dahliae Verticillium dahliae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5XMZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5XMZ FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5xmz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5xmz OCA], [http://pdbe.org/5xmz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5xmz RCSB], [http://www.ebi.ac.uk/pdbsum/5xmz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5xmz ProSAT]</span></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5xmz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5xmz OCA], [https://pdbe.org/5xmz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5xmz RCSB], [https://www.ebi.ac.uk/pdbsum/5xmz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5xmz ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/PEVD1_VERDA PEVD1_VERDA]] Effector protein (PubMed:21691787, PubMed:24080193, PubMed:24337817). Elicits a hypersensitive response (HR) in tobacco plants (N.tabacum) and cotton (G.hirsutum) (PubMed:21691787, PubMed:24080193, PubMed:24337817). Boosts systemic acquired resistance (SAR) to tobacco mosaic virus (TMV) infection in N.tabacum and to V.dhaliae infection in primed cotton seedlings (PubMed:21691787, PubMed:24080193, PubMed:24337817).<ref>PMID:21691787</ref> <ref>PMID:24080193</ref> <ref>PMID:24337817</ref>
+[https://www.uniprot.org/uniprot/PEVD1_VERDA PEVD1_VERDA] Effector protein (PubMed:21691787, PubMed:24080193, PubMed:24337817). Elicits a hypersensitive response (HR) in tobacco plants (N.tabacum) and cotton (G.hirsutum) (PubMed:21691787, PubMed:24080193, PubMed:24337817). Boosts systemic acquired resistance (SAR) to tobacco mosaic virus (TMV) infection in N.tabacum and to V.dhaliae infection in primed cotton seedlings (PubMed:21691787, PubMed:24080193, PubMed:24337817).<ref>PMID:21691787</ref> <ref>PMID:24080193</ref> <ref>PMID:24337817</ref>
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 23: / Line 24: @@
 </StructureSection>
 [[Category: Large Structures]]
-[[Category: Liu, X]]
+[[Category: Verticillium dahliae]]
-[[Category: Zhou, R]]
+[[Category: Liu X]]
-[[Category: Effector]]
+[[Category: Zhou R]]
-[[Category: Pevd1]]
-[[Category: Signaling protein]]
-[[Category: Verticillium]]

5xmz

From Proteopedia

Current revision

Verticillium effector PevD1

Structural highlights

Function

Publication Abstract from PubMed

References

Contents

Proteopedia Page Contributors and Editors (what is this?)

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