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| <StructureSection load='5xyh' size='340' side='right'caption='[[5xyh]], [[Resolution|resolution]] 1.86Å' scene=''> | | <StructureSection load='5xyh' size='340' side='right'caption='[[5xyh]], [[Resolution|resolution]] 1.86Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[5xyh]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5XYH OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5XYH FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[5xyh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Xanthomonas_oryzae_pv._oryzae Xanthomonas oryzae pv. oryzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5XYH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5XYH FirstGlance]. <br> |
- | </td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cellulose_1,4-beta-cellobiosidase_(non-reducing_end) Cellulose 1,4-beta-cellobiosidase (non-reducing end)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.91 3.2.1.91] </span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.864Å</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5xyh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5xyh OCA], [http://pdbe.org/5xyh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5xyh RCSB], [http://www.ebi.ac.uk/pdbsum/5xyh PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5xyh ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5xyh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5xyh OCA], [https://pdbe.org/5xyh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5xyh RCSB], [https://www.ebi.ac.uk/pdbsum/5xyh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5xyh ProSAT]</span></td></tr> |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/A0A384E106_XANOO A0A384E106_XANOO] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| </StructureSection> | | </StructureSection> |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Haque, A S]] | + | [[Category: Xanthomonas oryzae pv. oryzae]] |
- | [[Category: Kumar, S]] | + | [[Category: Haque AS]] |
- | [[Category: Nathawat, R]] | + | [[Category: Kumar S]] |
- | [[Category: Sankaranaryanan, R]] | + | [[Category: Nathawat R]] |
- | [[Category: Bacterial blight]] | + | [[Category: Sankaranaryanan R]] |
- | [[Category: Cell-wall degrading enzyme]]
| + | |
- | [[Category: Exoglucanase]]
| + | |
- | [[Category: Hydrolase]]
| + | |
- | [[Category: Xoo]]
| + | |
| Structural highlights
Function
A0A384E106_XANOO
Publication Abstract from PubMed
Xanthomonas oryzae pv. oryzae (Xoo) causes bacterial blight, a serious disease of rice. Xoo secretes a repertoire of cell wall-degrading enzymes, including cellulases, xylanases and pectinases, to degrade various polysaccharide components of the rice cell wall. A secreted Xoo cellulase, CbsA, is not only a key virulence factor of Xoo, but is also a potent inducer of innate immune responses of rice. In this study, we solved the crystal structure of the catalytic domain of the CbsA protein to a resolution of 1.86 A. The core structure of CbsA shows a central distorted TIM barrel made up of eight beta strands with N- and C-terminal loops enclosing the active site, which is a characteristic structural feature of an exoglucanase. The aspartic acid at the 131st position of CbsA was predicted to be important for catalysis and was therefore mutated to alanine to study its role in the catalysis and biological functions of CbsA. Intriguingly, the D131A CbsA mutant protein displayed the enzymatic activity of a typical endoglucanase. D131A CbsA was as proficient as wild-type (Wt) CbsA in inducing rice immune responses, but was deficient in virulence-promoting activity. This indicates that the specific exoglucanase activity of the Wt CbsA protein is required for this protein to promote the growth of Xoo in rice.
A mutation in an exoglucanase of Xanthomonas oryzae pv. oryzae, which confers an endo mode of activity, affects bacterial virulence, but not the induction of immune responses, in rice.,Tayi L, Kumar S, Nathawat R, Haque AS, Maku RV, Patel HK, Sankaranarayanan R, Sonti RV Mol Plant Pathol. 2018 Jun;19(6):1364-1376. doi: 10.1111/mpp.12620. Epub 2017 Dec, 26. PMID:28976110[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Tayi L, Kumar S, Nathawat R, Haque AS, Maku RV, Patel HK, Sankaranarayanan R, Sonti RV. A mutation in an exoglucanase of Xanthomonas oryzae pv. oryzae, which confers an endo mode of activity, affects bacterial virulence, but not the induction of immune responses, in rice. Mol Plant Pathol. 2018 Jun;19(6):1364-1376. doi: 10.1111/mpp.12620. Epub 2017 Dec, 26. PMID:28976110 doi:http://dx.doi.org/10.1111/mpp.12620
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