This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5y9b

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:24, 22 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5y9b' size='340' side='right'caption='[[5y9b]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
<StructureSection load='5y9b' size='340' side='right'caption='[[5y9b]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5y9b]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5Y9B OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5Y9B FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5y9b]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_licheniformis Bacillus licheniformis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5Y9B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5Y9B FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DON:6-DIAZENYL-5-OXO-L-NORLEUCINE'>DON</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.15&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5xlu|5xlu]], [[5y8x|5y8x]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DON:6-DIAZENYL-5-OXO-L-NORLEUCINE'>DON</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Gamma-glutamyltransferase Gamma-glutamyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.2.2 2.3.2.2] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5y9b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5y9b OCA], [https://pdbe.org/5y9b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5y9b RCSB], [https://www.ebi.ac.uk/pdbsum/5y9b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5y9b ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5y9b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5y9b OCA], [http://pdbe.org/5y9b PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5y9b RCSB], [http://www.ebi.ac.uk/pdbsum/5y9b PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5y9b ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q65KZ6_BACLD Q65KZ6_BACLD]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Gamma-glutamyltransferase]]
+
[[Category: Bacillus licheniformis]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Goel, M]]
+
[[Category: Goel M]]
-
[[Category: Gupta, R]]
+
[[Category: Gupta R]]
-
[[Category: Kumari, S]]
+
[[Category: Kumari S]]
-
[[Category: Pal, R]]
+
[[Category: Pal R]]
-
[[Category: Bacillus licheniformi]]
+
-
[[Category: Don]]
+
-
[[Category: Gamma glutamyl transpeptidase]]
+
-
[[Category: Transferase]]
+

Current revision

Crystal structure of Bacillus licheniformis Gamma glutamyl transpeptidase with DON

PDB ID 5y9b

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools