This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5zei

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:52, 22 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5zei' size='340' side='right'caption='[[5zei]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
<StructureSection load='5zei' size='340' side='right'caption='[[5zei]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5zei]] is a 2 chain structure. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4wcq 4wcq]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ZEI OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5ZEI FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5zei]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4wcq 4wcq]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ZEI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5ZEI FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GET:GENETICIN'>GET</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=1MA:6-HYDRO-1-METHYLADENOSINE-5-MONOPHOSPHATE'>1MA</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1MA:6-HYDRO-1-METHYLADENOSINE-5-MONOPHOSPHATE'>1MA</scene>, <scene name='pdbligand=GET:GENETICIN'>GET</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5zeg|5zeg]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5zei FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5zei OCA], [https://pdbe.org/5zei PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5zei RCSB], [https://www.ebi.ac.uk/pdbsum/5zei PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5zei ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5zei FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5zei OCA], [http://pdbe.org/5zei PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5zei RCSB], [http://www.ebi.ac.uk/pdbsum/5zei PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5zei ProSAT]</span></td></tr>
+
</table>
</table>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 23: Line 22:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Baba, F]]
+
[[Category: Synthetic construct]]
-
[[Category: Kanazawa, H]]
+
[[Category: Baba F]]
-
[[Category: Koganei, M]]
+
[[Category: Kanazawa H]]
-
[[Category: Kondo, J]]
+
[[Category: Koganei M]]
-
[[Category: Aminoglycoside]]
+
[[Category: Kondo J]]
-
[[Category: Antibiotic-resistance]]
+
-
[[Category: Ribosome]]
+
-
[[Category: Rna]]
+

Current revision

Crystal structure of the bacterial A1408me1A-mutant ribosomal decoding site in complex with geneticin

PDB ID 5zei

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools