This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6avp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:18, 13 March 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='6avp' size='340' side='right'caption='[[6avp]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
<StructureSection load='6avp' size='340' side='right'caption='[[6avp]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6avp]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6AVP OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6AVP FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6avp]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6AVP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6AVP FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=N7E:N~3~-[(2R)-2-HYDROXY-3,3-DIMETHYL-4-(PHOSPHONOOXY)BUTANOYL]-N-(5-METHOXYPENTYL)-BETA-ALANINAMIDE'>N7E</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Pantothenate_kinase Pantothenate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.33 2.7.1.33] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=N7E:N~3~-[(2R)-2-HYDROXY-3,3-DIMETHYL-4-(PHOSPHONOOXY)BUTANOYL]-N-(5-METHOXYPENTYL)-BETA-ALANINAMIDE'>N7E</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6avp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6avp OCA], [http://pdbe.org/6avp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6avp RCSB], [http://www.ebi.ac.uk/pdbsum/6avp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6avp ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6avp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6avp OCA], [https://pdbe.org/6avp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6avp RCSB], [https://www.ebi.ac.uk/pdbsum/6avp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6avp ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/A0A167Z3Z6_STAAU A0A167Z3Z6_STAAU]] Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.[HAMAP-Rule:MF_01273]
+
[https://www.uniprot.org/uniprot/COAW_STAA8 COAW_STAA8] Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.<ref>PMID:12760898</ref>
==See Also==
==See Also==
*[[Pantothenate kinase 3D structures|Pantothenate kinase 3D structures]]
*[[Pantothenate kinase 3D structures|Pantothenate kinase 3D structures]]
 +
== References ==
 +
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Pantothenate kinase]]
 
-
[[Category: Antoshchenko, T]]
 
-
[[Category: Barnard, L]]
 
-
[[Category: Chen, Y]]
 
-
[[Category: Huang, Y H]]
 
-
[[Category: Strauss, E]]
 
-
[[Category: Adp]]
 
-
[[Category: Pantothenate analog]]
 
-
[[Category: Sapank]]
 
[[Category: Staphylococcus aureus]]
[[Category: Staphylococcus aureus]]
-
[[Category: Transferase]]
+
[[Category: Antoshchenko T]]
 +
[[Category: Barnard L]]
 +
[[Category: Chen Y]]
 +
[[Category: Huang YH]]
 +
[[Category: Strauss E]]

Current revision

Staphylococcus aureus Type II pantothenate kinase in complex with ADP and pantothenate analog Phosphate-MeO-N5Pan

PDB ID 6avp

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools