This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6ba3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:40, 8 March 2023) (edit) (undo)
 
Line 1: Line 1:
==NMR structure of U21-hexatoxin-Hi1a toxin from Australian Funnel-web spider Hadronyche infensa==
==NMR structure of U21-hexatoxin-Hi1a toxin from Australian Funnel-web spider Hadronyche infensa==
-
<StructureSection load='6ba3' size='340' side='right'caption='[[6ba3]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
+
<StructureSection load='6ba3' size='340' side='right'caption='[[6ba3]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6ba3]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6BA3 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6BA3 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6ba3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Hadronyche_infensa Hadronyche infensa]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6BA3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6BA3 FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6ba3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ba3 OCA], [http://pdbe.org/6ba3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6ba3 RCSB], [http://www.ebi.ac.uk/pdbsum/6ba3 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6ba3 ProSAT]</span></td></tr>
+
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6ba3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ba3 OCA], [https://pdbe.org/6ba3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6ba3 RCSB], [https://www.ebi.ac.uk/pdbsum/6ba3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6ba3 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/TX21_HADIN TX21_HADIN]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Spiders are one of the most successful venomous animals, with more than 48,000 described species. Most spider venoms are dominated by cysteine-rich peptides with a diverse range of pharmacological activities. Some spider venoms contain thousands of unique peptides, but little is known about the mechanisms used to generate such complex chemical arsenals. We used an integrated transcriptomic, proteomic, and structural biology approach to demonstrate that the lethal Australian funnel-web spider produces 33 superfamilies of venom peptides and proteins. Twenty-six of the 33 superfamilies are disulfide-rich peptides, and we show that 15 of these are knottins that contribute &gt;90% of the venom proteome. NMR analyses revealed that most of these disulfide-rich peptides are structurally related and range in complexity from simple to highly elaborated knottin domains, as well as double-knot toxins, that likely evolved from a single ancestral toxin gene.
 +
 +
Structural venomics reveals evolution of a complex venom by duplication and diversification of an ancient peptide-encoding gene.,Pineda SS, Chin YK, Undheim EAB, Senff S, Mobli M, Dauly C, Escoubas P, Nicholson GM, Kaas Q, Guo S, Herzig V, Mattick JS, King GF Proc Natl Acad Sci U S A. 2020 May 26;117(21):11399-11408. doi: , 10.1073/pnas.1914536117. Epub 2020 May 12. PMID:32398368<ref>PMID:32398368</ref>
 +
 +
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 6ba3" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Hadronyche infensa]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Chin, Y K.Y]]
+
[[Category: Chin YK-Y]]
-
[[Category: King, G F]]
+
[[Category: King GF]]
-
[[Category: Pineda, S S]]
+
[[Category: Pineda SS]]
-
[[Category: Spider toxin inhibitor cystine knot]]
+
-
[[Category: Toxin]]
+

Current revision

NMR structure of U21-hexatoxin-Hi1a toxin from Australian Funnel-web spider Hadronyche infensa

PDB ID 6ba3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools