Hypoxia-Inducible Factors

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 44: Line 44:
Due to the protective role of HIF, therapies based on small-molecules that stabilize HIF-α have attracted a lot of attention. In pathologies such as ischemia or [https://en.wikipedia.org/wiki/Stroke stroke], HIF activation could help to reduce the damage done by the lack of oxygen and restore tissue functionality. This objective can be achieved by two different ways: inhibition of HIF-PHD pathway or without the inhibition of PHDs <ref>PMID: 30671433</ref>.
Due to the protective role of HIF, therapies based on small-molecules that stabilize HIF-α have attracted a lot of attention. In pathologies such as ischemia or [https://en.wikipedia.org/wiki/Stroke stroke], HIF activation could help to reduce the damage done by the lack of oxygen and restore tissue functionality. This objective can be achieved by two different ways: inhibition of HIF-PHD pathway or without the inhibition of PHDs <ref>PMID: 30671433</ref>.
-
====HIF-1α Up-Regulation via Inhibition of PHD Pathway====
+
====HIF-1α Upregulation via Inhibition of PHD Pathway====
This group includes the majority of HIF-1α upregulators. PHDs inhibition can be achieved through different interventions:
This group includes the majority of HIF-1α upregulators. PHDs inhibition can be achieved through different interventions:
=====Iron chelators and competitors=====
=====Iron chelators and competitors=====
Line 53: Line 53:
Instead of sequestering Fe2+ ions or mimicking 2-oxoglutarate binding, some molecules can bind directly into the active site of PHDs. '''FG-4497''' is a PHD inhibitor that stabilizes HIF-1α and upregulates VEGF and EPO in murine cell lines. It has also been shown to enhance cell survival following oxygen-glucose deprivation. Indeed, intraperitoneal administration of FG-4497 can reduce infarct size<ref>PMID: 24409307</ref>. On the other hand, [https://en.wikipedia.org/wiki/Folate '''Folic acid'''] ('''FA''') can directly inhibit PHD2, FIH-1 and pVHL. Post-ischemic ''in vivo'' treatments showed that FA upregulated HIF-1α and its target genes<ref>PMID: 29542054</ref>.
Instead of sequestering Fe2+ ions or mimicking 2-oxoglutarate binding, some molecules can bind directly into the active site of PHDs. '''FG-4497''' is a PHD inhibitor that stabilizes HIF-1α and upregulates VEGF and EPO in murine cell lines. It has also been shown to enhance cell survival following oxygen-glucose deprivation. Indeed, intraperitoneal administration of FG-4497 can reduce infarct size<ref>PMID: 24409307</ref>. On the other hand, [https://en.wikipedia.org/wiki/Folate '''Folic acid'''] ('''FA''') can directly inhibit PHD2, FIH-1 and pVHL. Post-ischemic ''in vivo'' treatments showed that FA upregulated HIF-1α and its target genes<ref>PMID: 29542054</ref>.
-
====HIF-1α Up-Regulation Without the Inhibition of PHDs====
+
====HIF-1α Upregulation Without the Inhibition of PHDs====
These kinds of molecules have been recently discovered. They can upregulate HIF-1α in different ways:
These kinds of molecules have been recently discovered. They can upregulate HIF-1α in different ways:
*'''MiR-335''' is a [https://en.wikipedia.org/wiki/MicroRNA '''microRNA'''] that directly regulates HIF-1α. Treatment with this microRNA decreased infarct volume in rat models when administered early after ischemia induction, but inhibition of miR-335 in later phases surprisingly had beneficial effects. This could be due to the biphasic nature of HIF-1α<ref>PMID: 26030758</ref>.
*'''MiR-335''' is a [https://en.wikipedia.org/wiki/MicroRNA '''microRNA'''] that directly regulates HIF-1α. Treatment with this microRNA decreased infarct volume in rat models when administered early after ischemia induction, but inhibition of miR-335 in later phases surprisingly had beneficial effects. This could be due to the biphasic nature of HIF-1α<ref>PMID: 26030758</ref>.
Line 66: Line 66:
*'''PI3K/Akt/mTOR inhibitors''': [https://en.wikipedia.org/wiki/PI3K/AKT/mTOR_pathway PI3K/Akt/mTOR] plays a major role in the upregulation of HIF-1 several human cancer cell lines, mainly by increasing the rate of HIF-1α protein translation. Although the process by which this pathway regulates HIF protein translation is still poorly understood, several mTOR inhibitors, such as [https://pubchem.ncbi.nlm.nih.gov/compound/temsirolimus '''temsirolimus'''] and [https://pubchem.ncbi.nlm.nih.gov/compound/everolimus '''everolimus'''], which are two FDA approved agents for the treatment of different types of cancer, have shown to inhibit HIF-1α.
*'''PI3K/Akt/mTOR inhibitors''': [https://en.wikipedia.org/wiki/PI3K/AKT/mTOR_pathway PI3K/Akt/mTOR] plays a major role in the upregulation of HIF-1 several human cancer cell lines, mainly by increasing the rate of HIF-1α protein translation. Although the process by which this pathway regulates HIF protein translation is still poorly understood, several mTOR inhibitors, such as [https://pubchem.ncbi.nlm.nih.gov/compound/temsirolimus '''temsirolimus'''] and [https://pubchem.ncbi.nlm.nih.gov/compound/everolimus '''everolimus'''], which are two FDA approved agents for the treatment of different types of cancer, have shown to inhibit HIF-1α.
*'''Camptothecin analogues''' ('''CPTs'''): CPTs analogues are used as chemotherapeutic agents that induce the formation of [[Topoisomerase]] I-DNA cleavage complexes, which in the presence of DNA replication generate double strand DNA breaks and cytotoxicity. Among the CPTs is [https://en.wikipedia.org/wiki/Topotecan '''Topotecan'''], a chemotherapeutic agent that has been approved for the treatment of ovarian cancer, cervical cancer and non-small cell lung carcinoma. This agent act as a HIF inhibitor by blocking HIF-1α protein accumulation and transcriptional activity in a topoisomerase I-dependent manner<ref>PMID: 14983893</ref>.
*'''Camptothecin analogues''' ('''CPTs'''): CPTs analogues are used as chemotherapeutic agents that induce the formation of [[Topoisomerase]] I-DNA cleavage complexes, which in the presence of DNA replication generate double strand DNA breaks and cytotoxicity. Among the CPTs is [https://en.wikipedia.org/wiki/Topotecan '''Topotecan'''], a chemotherapeutic agent that has been approved for the treatment of ovarian cancer, cervical cancer and non-small cell lung carcinoma. This agent act as a HIF inhibitor by blocking HIF-1α protein accumulation and transcriptional activity in a topoisomerase I-dependent manner<ref>PMID: 14983893</ref>.
 +
*'''Steroidal HIF inhibitors''': [https://pubchem.ncbi.nlm.nih.gov/compound/2-Methoxyestradiol '''2-Methoxyestradiol'''] ('''2ME2''' or panzem) is a natural metabolite of estradiol that inhibits HIF-1α translation and transcriptional activity. Although the specific mechanism by 2ME2 and its synthetic analogues inhibit HIF is unknown, these compounds bind to the [https://pubchem.ncbi.nlm.nih.gov/compound/6167 colchicine] binding site of [[tubulin]] and cause the disruption of tumor interphase microtubules, which results in repression of HIF-1α at translation level <ref>PMID: 12726862</ref>. 2ME2 and its synthetic analogues have shown antitumoral activity in preclinical models as well as favorable oral bioavailability, metabolic stability and safety profiles <ref>PMID: 12726862</ref>. Unfortunately, 2ME2 has been evaluated in several clinical trials both alone and in combination with other drugs and has shown limited efficacy in the treatment of different types of cancer.
 +
=====Inhibitors of HIF stabilization=====
 +
*'''HSP90 inhibitors''': The binding of [https://en.wikipedia.org/wiki/Hsp90 '''HSP90'''] to HIF-1α promotes HIF-1α activity by blocking the pVHL-independent proteasomal degradation and also by helping HIF-1α heterodimers acquire the appropriate conformation to recruit p300 and consequently initiate HIF transactivation. The first HSP90 inhibitor identified was the natural product [https://en.wikipedia.org/wiki/Geldanamycin '''geldanamycin'''], a benzoquinone ansamyzine antibiotic that inhibits HSP90 by competing with its ATP binding site. Several HSP90 inhibitors have been developed since, and despite their promising results in preclinical studies, they have demonstrated limited efficacy during clinical trials <ref>DOI: https://doi.org/10.1146/annurev-cancerbio-030518-055533</ref>.
 +
*'''Histone deacetylase inhibitors''' ('''HDACi'''): [[Histone deacetylase | Histone deacetylases]] mediate the removal of acetyl groups from target proteins, regulating their function<ref>PMID: 25746107</ref>. Treatment with HDACi results in the hyperacetylation of histones and other target proteins such as the chaperone HSP90, leading to a loss of activity. It was recently described that this HSP90 inhibition by an HDACi such as [[Zolinza (Vorinostat) | '''Vorinostat''']] leads to an alteration in HIF-1α signaling by interfering with its ability to translocate to the nucleus<ref>PMID: 28915577</ref>, although other mechanisms of alteration of HIF-1α signalling by HDAC1 have been proposed<ref>PMID: 25746107</ref>. Vorinostat and [https://pubchem.ncbi.nlm.nih.gov/compound/Romidepsin '''Romidepsin'''] have been recently approved for the treatment of cutaneous T cell lymphoma (CTCL), and these and others are currently being evaluated for the treatment of various tumors, both alone and in combination with other agents<ref>PMID: 25746107</ref>.
 +
 +
====Direct HIF inhibitors====
 +
=====Inhibitors of HIF-1 dimerization=====
 +
*[https://pubchem.ncbi.nlm.nih.gov/compound/PT-2385-_R-enantiomer '''PT2385'''] and [https://pubchem.ncbi.nlm.nih.gov/compound/91663289 '''PT2399'''] are recently discovered small molecules and selective HIF-2α inhibitors that bind to the HIF-1β hydrophobic pocket and allosterically block its dimerization with HIF-2α (see below).
 +
*[https://en.wikipedia.org/wiki/Acriflavine '''Acriflavine'''] is a mixture of trypaflavin (3,6-diamino-10-methylacridinium chloride) and proflavine (3,6-diaminoacridine), which has trypanocidal, antibacterial, and antiviral activities. Acriflavine is also a HIF inhibitor that acts through inhibition of HIF-1 dimerization by binding to the PAS-B subdomain of HIF-1α and HIF-2α<ref>PMID: 19805192</ref>. This agent has demonstrated highly promising antitumor activity against a wide spectrum of cancers, including colorectal, hepatocellular, and ovarian cancer cell lines, and more recently in malignant brain cancer both ''in vitro'' and ''in vivo''<ref>PMID: 29097800</ref>. Its promising safety profile and characteristic ability of binding to both HIF-1α and HIF-2α subunits makes it a promising candidate for clinical evaluation.
 +
=====Inhibitors of HIF-1 transcriptional activity=====
 +
*[https://en.wikipedia.org/wiki/Cardenolide '''Cardenolides'''] are natural steroids with 25–26 carbon atoms and a five or six-membered lactone ring at C-17. Among them, [https://pubchem.ncbi.nlm.nih.gov/compound/Digoxin '''Digoxin'''] is a widely used [https://en.wikipedia.org/wiki/Cardiac_glycoside cardiac glycoside] that has been in clinical use for the treatment of heart failure for many years. This compound also shows HIF-1 inhibitory activity, which has demonstrated efficiency to block tumor growth, invasion, vascularization and metastasis of breast cancer (among other cancer types) both ex vivo and in vivo assays<ref>PMID: 19020076</ref>. Digoxin was well tolerated by patients of prostate cancer in a phase II clinical trial and has been evaluated both alone and in combination with other therapies for other types of cancer. It has also demonstrated great efficacy as an inhibitor of pathological angiogenesis in a murine model of ischemic retinopathy<ref>PMID: 20065104</ref>.
 +
*[https://pubchem.ncbi.nlm.nih.gov/compound/chetomin '''Chetomin'''] is an antimicrobial dithioketopiperazine fungal metabolite which acts as a HIF-1 inhibitor by blocking its transcriptional co-activation pathway. Chetomin binds to the CH1 domain of the co-activator [https://en.wikipedia.org/wiki/P300-CBP_coactivator_family p300/CBP] and disrupts its tertiary structure, thus hindering its interaction with HIF-1 and lowering its transactivation. This compound exhibited antitumoral activity both ''in vitro'' and ''in vivo'' in a murine model of prostate cancer<ref>PMID: 24775564</ref>, however, the usefulness of this HIF inhibitor is limited by its toxicity.
 +
*[https://pubchem.ncbi.nlm.nih.gov/compound/bortezomib '''Bortemozib'''] is the first proteasome inhibitor that has been approved by the FDA, in this case for the treatment of multiple myeloma. It has more recently been identified as an HIF-1 inhibitor which simulates the interaction between the C-TAD domain of HIF-1 and FIH target site, thus enhancing FIH mediated repression of p300 recruitment and lowering HIF transactivation<ref>PMID: 21909688</ref>.
 +
=====Inhibitors of HIF-1/DNA binding=====
 +
[https://pubchem.ncbi.nlm.nih.gov/compound/Echinomycin '''Echinomycin'''] is a natural cyclic peptide that belongs to the quinoxaline antibiotic family. It also acts as a HIF-1 inhibitor by specifically binding to the core of its recognition sequence, impeding HIF-1 to bind to its target DNA sequence<ref>PMID: 16204079</ref>. Although it demonstrated antitumor activity in preclinical studies, no significant antitumoral activity was observed in clinical trials<ref>PMID: 16204079</ref>.
 +
 +
 +
 +

Revision as of 17:02, 24 November 2020

Crystal structure of N-terminal HIF-2α/HIF-1β Complex with HRE DNA (PDB code 4ZPK)

Drag the structure with the mouse to rotate
Personal tools