Hypoxia-Inducible Factors

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====HIF-1α Upregulation via Inhibition of PHD Pathway====
====HIF-1α Upregulation via Inhibition of PHD Pathway====
This group includes the majority of HIF-1α upregulators. PHDs inhibition can be achieved through different interventions:
This group includes the majority of HIF-1α upregulators. PHDs inhibition can be achieved through different interventions:
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*Iron chelators and competitors: Iron chelators reduce the number of free iron (Fe2+) by binding tightly to it. In this way, PHD enzymes do not have enough available iron to carry out the hydroxylation reaction and the expression of HIF-1α is upregulated. Also, iron competitors such as Co2+ or Mn2+ can be used <ref>PMID: 30671433</ref>. [https://en.wikipedia.org/wiki/Deferoxamine '''Deferoxamine (DFO)'''] and [https://en.wikipedia.org/wiki/Mimosine '''mimosine'''] were the first iron chelators to mediate HIF-1α neuroprotection. Pre-treatment with DFO protected neurons from oxidative stress-induced death by inhibiting PHDs, therefore increasing mRNA and protein expression of both HIF-1α and its controlled genes <ref>PMID: 10559391</ref>. [https://en.wikipedia.org/wiki/2,2%E2%80%B2-Bipyridine '''2,2-dipyridyl'''] ('''DP''') is a liposoluble iron chelator that upregulates HIF-1α expression. Treatment with this drug decreased expansion of tissue damage after ischemia and protected neurons and endothelial cells by decreasing the amount of [https://en.wikipedia.org/wiki/Reactive_oxygen_species '''reactive oxygen species'''] ('''ROS''') <ref>PMID: 15280435</ref>.
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*[https://en.wikipedia.org/wiki/Alpha-Ketoglutaric_acid '''2-oxoglutarate''']: is a required co-substrate for the hydroxylation reaction by PHDs. So, compounds such as hydroxybenzenes or their analogous can inhibit PHD action to stabilize HIF-1α an allow gene expression of its targets. [https://pubchem.ncbi.nlm.nih.gov/compound/Dimethyloxalylglycine#section=2D-Structure '''Dimethyloxalylglycine'''] ('''DMOG''') is a cell permeable ester that prevents HIF-1α degradation and increases VEGF levels in ischemic neurons. Studies in animal stroke models showed reduced ischemic injury in neurons and a lower degree of damage <ref>PMID: 20407463</ref>.
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*Iron chelators and competitors: Iron chelators reduce the number of free iron (Fe2+) by binding tightly to it. In this way, PHD enzymes do not have enough available iron to carry out the hydroxylation reaction and the expression of HIF-1α is upregulated. Also, iron competitors such as Co2+ or Mn2+ can be used <ref>PMID: 30671433</ref>. [https://en.wikipedia.org/wiki/Deferoxamine '''Deferoxamine (DFO)'''] and [https://en.wikipedia.org/wiki/Mimosine '''mimosine'''] were the first iron chelators to mediate HIF-1α neuroprotection. Pre-treatment with DFO protected neurons from oxidative stress-induced death by inhibiting PHDs, therefore increasing mRNA and protein expression of both HIF-1α and its controlled genes <ref>PMID: 10559391</ref>. [https://en.wikipedia.org/wiki/2,2%E2%80%B2-Bipyridine '''2,2-dipyridyl'''] ('''DP''') is a liposoluble iron chelator that upregulates HIF-1α expression. Treatment with this drug decreased expansion of tissue damage after ischemia and protected neurons and endothelial cells by decreasing the amount of [https://en.wikipedia.org/wiki/Reactive_oxygen_species '''reactive oxygen species'''] ('''ROS''') <ref>PMID: 15280435</ref>. Pre-treatment with DP showed more neuroprotection than post-treatment, which makes it difficult to translate into the clinic.
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*Alternative mechanism of action: Instead of sequestering Fe2+ ions or mimicking 2-oxoglutarate binding, some molecules can bind directly into the active site of PHDs. '''FG-4497''' is a PHD inhibitor that stabilizes HIF-1α and upregulates VEGF and EPO in murine cell lines. It has also been shown to enhance cell survival following oxygen-glucose deprivation. Indeed, intraperitoneal administration of FG-4497 can reduce infarct size<ref>PMID: 24409307</ref>. On the other hand, [https://en.wikipedia.org/wiki/Folate '''Folic acid'''] ('''FA''') can directly inhibit PHD2, FIH-1 and pVHL. Post-ischemic ''in vivo'' treatments showed that FA upregulated HIF-1α and its target genes<ref>PMID: 29542054</ref>.
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*[https://en.wikipedia.org/wiki/Alpha-Ketoglutaric_acid '''2-oxoglutarate''']: is a required co-substrate for the hydroxylation reaction by PHDs. So, compounds such as hydroxybenzenes or their analogous can inhibit PHD action to stabilize HIF-1α an allow gene expression of its targets. [https://pubchem.ncbi.nlm.nih.gov/compound/Dimethyloxalylglycine#section=2D-Structure '''Dimethyloxalylglycine'''] ('''DMOG''') is a cell permeable ester that prevents HIF-1α degradation and increases VEGF levels in ischemic neurons. Studies in animal stroke models showed reduced ischemic injury in neurons and a lower degree of blood-brain barrier damage <ref>PMID: 20407463</ref>.
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*Alternative mechanism of action: Instead of sequestering Fe2+ ions or mimicking 2-oxoglutarate binding, some molecules can bind directly into the active site of PHDs. '''FG-4497''' is a PHD inhibitor that stabilizes HIF-1α and upregulates VEGF and EPO in murine cell lines. It has also been shown to enhance cell survival following oxygen-glucose deprivation. Indeed, intraperitoneal administration of FG-4497 can reduce infarct size<ref>PMID: 24409307</ref>. Pre-treatment with this drug also showed neuroprotection following permanent cerebral ischemia. On the other hand, [https://en.wikipedia.org/wiki/Folate '''Folic acid'''] ('''FA''') can directly inhibit PHD2, FIH-1 and pVHL. Post-ischemic ''in vivo'' treatments showed that FA upregulated HIF-1α and its target genes, conferring neuroprotection<ref>PMID: 29542054</ref>.
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these treatments have some disadvantages because the iron chelators and 2OG analogues can interfere in different pathways. Also, few studies have shown the activation of pro-death proteins on brain cells after treatment with PHD inhibitors. So, novel drugs that specifically target PHDs or HIF-1α would be a better option
====HIF-1α Upregulation Without the Inhibition of PHDs====
====HIF-1α Upregulation Without the Inhibition of PHDs====

Revision as of 18:01, 24 November 2020

Crystal structure of N-terminal HIF-2α/HIF-1β Complex with HRE DNA (PDB code 4ZPK)

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