This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1jg8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:52, 3 April 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='1jg8' size='340' side='right'caption='[[1jg8]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
<StructureSection load='1jg8' size='340' side='right'caption='[[1jg8]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1jg8]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_43589 Atcc 43589]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JG8 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1JG8 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1jg8]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JG8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JG8 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=LLP:(2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5-(PHOSPHONOOXYMETHYL)PYRIDIN-4-YL]METHYLIDENEAMINO]HEXANOIC+ACID'>LLP</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=LLP:(2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5-(PHOSPHONOOXYMETHYL)PYRIDIN-4-YL]METHYLIDENEAMINO]HEXANOIC+ACID'>LLP</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TM1744 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2336 ATCC 43589])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jg8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jg8 OCA], [https://pdbe.org/1jg8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jg8 RCSB], [https://www.ebi.ac.uk/pdbsum/1jg8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jg8 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1jg8 TOPSAN]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/L-threonine_aldolase L-threonine aldolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.2.5 4.1.2.5] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1jg8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jg8 OCA], [http://pdbe.org/1jg8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1jg8 RCSB], [http://www.ebi.ac.uk/pdbsum/1jg8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1jg8 ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/1jg8 TOPSAN]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9X266_THEMA Q9X266_THEMA]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 25: Line 25:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Atcc 43589]]
 
-
[[Category: L-threonine aldolase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Bonanno, J]]
+
[[Category: Thermotoga maritima]]
-
[[Category: Burley, S K]]
+
[[Category: Bonanno J]]
-
[[Category: Kielkopf, C L]]
+
[[Category: Burley SK]]
-
[[Category: Structural genomic]]
+
[[Category: Kielkopf CL]]
-
[[Category: Ray, S]]
+
[[Category: Ray S]]
-
[[Category: Calcium binding site]]
+
-
[[Category: Glycine biosynthesis]]
+
-
[[Category: Lyase]]
+
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Pyridoxal-5'-phosphate]]
+
-
[[Category: Threonine aldolase]]
+

Current revision

Crystal Structure of Threonine Aldolase (Low-specificity)

PDB ID 1jg8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools