1ny1
From Proteopedia
(Difference between revisions)
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<StructureSection load='1ny1' size='340' side='right'caption='[[1ny1]], [[Resolution|resolution]] 1.80Å' scene=''> | <StructureSection load='1ny1' size='340' side='right'caption='[[1ny1]], [[Resolution|resolution]] 1.80Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[1ny1]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[1ny1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NY1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NY1 FirstGlance]. <br> |
- | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> |
- | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ny1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ny1 OCA], [https://pdbe.org/1ny1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ny1 RCSB], [https://www.ebi.ac.uk/pdbsum/1ny1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ny1 ProSAT], [https://www.topsan.org/Proteins/NESGC/1ny1 TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
- | [ | + | [https://www.uniprot.org/uniprot/PDAA_BACSU PDAA_BACSU] Catalyzes the deacetylation of N-acetylmuramic acid (MurNAc) residues in glycan strands of peptidoglycan, leading to the formation of muramic delta-lactam residues in spore cortex, after transpeptidation of deacetylated muramic acid residues. PdaA probably carries out both deacetylation and lactam ring formation and requires the product of CwlD activity on peptidoglycan as a substrate. Is required for germination. Cannot use chitin oligomer (hexa-N-acetylchitohexaose) as a substrate.<ref>PMID:12374835</ref> <ref>PMID:14679227</ref> <ref>PMID:15687192</ref> |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Bacillus subtilis]] |
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Acton | + | [[Category: Acton TB]] |
- | [[Category: Chiang | + | [[Category: Chiang Y]] |
- | [[Category: Edstrom | + | [[Category: Edstrom W]] |
- | [[Category: Forouhar | + | [[Category: Forouhar F]] |
- | [[Category: Hunt | + | [[Category: Hunt JF]] |
- | [[Category: Khan | + | [[Category: Khan J]] |
- | [[Category: Ma | + | [[Category: Ma L]] |
- | [[Category: Montelione | + | [[Category: Montelione GT]] |
- | + | [[Category: Tong L]] | |
- | [[Category: Tong | + | |
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Revision as of 08:54, 10 April 2024
CRYSTAL STRUCTURE OF B. SUBTILIS POLYSACCHARIDE DEACETYLASE NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET SR127.
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Categories: Bacillus subtilis | Large Structures | Acton TB | Chiang Y | Edstrom W | Forouhar F | Hunt JF | Khan J | Ma L | Montelione GT | Tong L