6vgi

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Current revision (08:12, 11 October 2023) (edit) (undo)
 
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<StructureSection load='6vgi' size='340' side='right'caption='[[6vgi]], [[Resolution|resolution]] 2.61&Aring;' scene=''>
<StructureSection load='6vgi' size='340' side='right'caption='[[6vgi]], [[Resolution|resolution]] 2.61&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6vgi]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6VGI OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6VGI FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6vgi]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6VGI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6VGI FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=QY7:3-[3-(tert-butylsulfanyl)-1-[(4-chlorophenyl)methyl]-5-(propan-2-yl)-1H-indol-2-yl]-2,2-dimethylpropanoic+acid'>QY7</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.61&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ALOX5AP, FLAP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=QY7:3-[3-(tert-butylsulfanyl)-1-[(4-chlorophenyl)methyl]-5-(propan-2-yl)-1H-indol-2-yl]-2,2-dimethylpropanoic+acid'>QY7</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6vgi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6vgi OCA], [http://pdbe.org/6vgi PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6vgi RCSB], [http://www.ebi.ac.uk/pdbsum/6vgi PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6vgi ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6vgi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6vgi OCA], [https://pdbe.org/6vgi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6vgi RCSB], [https://www.ebi.ac.uk/pdbsum/6vgi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6vgi ProSAT]</span></td></tr>
</table>
</table>
== Disease ==
== Disease ==
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[[http://www.uniprot.org/uniprot/AL5AP_HUMAN AL5AP_HUMAN]] Genetic variations in ALOX5AP may be a cause of susceptibility to ischemic stroke (ISCHSTR) [MIM:[http://omim.org/entry/601367 601367]]; also known as cerebrovascular accident or cerebral infarction. A stroke is an acute neurologic event leading to death of neural tissue of the brain and resulting in loss of motor, sensory and/or cognitive function. Ischemic strokes, resulting from vascular occlusion, is considered to be a highly complex disease consisting of a group of heterogeneous disorders with multiple genetic and environmental risk factors.<ref>PMID:14770184</ref> Note=Genetic variations in ALOX5AP may be associated with susceptibility to myocardial infarction. Involvement in myocardial infarction is however unclear: according to some authors (PubMed:14770184), a 4-SNP haplotype in ALOX5AP confers risk of myocardial infarction, while according to other (PubMed:17304054) ALOX5AP is not implicated in this condition.
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[https://www.uniprot.org/uniprot/AL5AP_HUMAN AL5AP_HUMAN] Genetic variations in ALOX5AP may be a cause of susceptibility to ischemic stroke (ISCHSTR) [MIM:[https://omim.org/entry/601367 601367]; also known as cerebrovascular accident or cerebral infarction. A stroke is an acute neurologic event leading to death of neural tissue of the brain and resulting in loss of motor, sensory and/or cognitive function. Ischemic strokes, resulting from vascular occlusion, is considered to be a highly complex disease consisting of a group of heterogeneous disorders with multiple genetic and environmental risk factors.<ref>PMID:14770184</ref> Note=Genetic variations in ALOX5AP may be associated with susceptibility to myocardial infarction. Involvement in myocardial infarction is however unclear: according to some authors (PubMed:14770184), a 4-SNP haplotype in ALOX5AP confers risk of myocardial infarction, while according to other (PubMed:17304054) ALOX5AP is not implicated in this condition.
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/AL5AP_HUMAN AL5AP_HUMAN]] Required for leukotriene biosynthesis by ALOX5 (5-lipoxygenase). Anchors ALOX5 to the membrane. Binds arachidonic acid, and could play an essential role in the transfer of arachidonic acid to ALOX5. Binds to MK-886, a compound that blocks the biosynthesis of leukotrienes.<ref>PMID:2300173</ref> <ref>PMID:8440384</ref>
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[https://www.uniprot.org/uniprot/AL5AP_HUMAN AL5AP_HUMAN] Required for leukotriene biosynthesis by ALOX5 (5-lipoxygenase). Anchors ALOX5 to the membrane. Binds arachidonic acid, and could play an essential role in the transfer of arachidonic acid to ALOX5. Binds to MK-886, a compound that blocks the biosynthesis of leukotrienes.<ref>PMID:2300173</ref> <ref>PMID:8440384</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Human]]
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[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Antonysamy, S]]
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[[Category: Antonysamy S]]
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[[Category: Aznavour, K]]
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[[Category: Aznavour K]]
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[[Category: Chandrasekhar, S]]
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[[Category: Chandrasekhar S]]
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[[Category: Condon, B]]
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[[Category: Condon B]]
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[[Category: Gooding, K]]
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[[Category: Gooding K]]
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[[Category: Harvey, A]]
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[[Category: Harvey A]]
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[[Category: Hickey, M J]]
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[[Category: Hickey MJ]]
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[[Category: Ho, J D]]
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[[Category: Ho JD]]
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[[Category: Hughes, N E]]
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[[Category: Hughes NE]]
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[[Category: Kahl, S D]]
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[[Category: Kahl SD]]
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[[Category: Lee, M R]]
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[[Category: Lee MR]]
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[[Category: Luz, J G]]
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[[Category: Luz JG]]
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[[Category: Maletic, M]]
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[[Category: Maletic M]]
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[[Category: Norman, B H]]
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[[Category: Norman BH]]
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[[Category: Park, J S]]
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[[Category: Park JS]]
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[[Category: Rauch, C T]]
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[[Category: Rauch CT]]
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[[Category: Sloan, A V]]
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[[Category: Sloan AV]]
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[[Category: Yu, X P]]
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[[Category: Yu XP]]
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[[Category: Zhang, A]]
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[[Category: Zhang A]]
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[[Category: 5-lipoxygenase activating protein]]
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[[Category: Flap]]
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[[Category: Membrane protein]]
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[[Category: Mk-866]]
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Current revision

Crystal Structures of FLAP bound to MK-866

PDB ID 6vgi

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