This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1pt3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:46, 16 August 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='1pt3' size='340' side='right'caption='[[1pt3]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
<StructureSection load='1pt3' size='340' side='right'caption='[[1pt3]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1pt3]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecow3 Ecow3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PT3 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1PT3 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1pt3]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_str._K-12_substr._W3110 Escherichia coli str. K-12 substr. W3110]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PT3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PT3 FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[7cei|7cei]], [[1m08|1m08]], [[1mz8|1mz8]]</div></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">COLE7 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=316407 ECOW3])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1pt3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pt3 OCA], [https://pdbe.org/1pt3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1pt3 RCSB], [https://www.ebi.ac.uk/pdbsum/1pt3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1pt3 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1pt3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pt3 OCA], [http://pdbe.org/1pt3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1pt3 RCSB], [http://www.ebi.ac.uk/pdbsum/1pt3 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1pt3 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/CEA7_ECOLX CEA7_ECOLX]] This plasmid-coded bactericidal protein is an endonuclease active on both single- and double-stranded DNA but with undefined specificity. Colicins are polypeptide toxins produced by and active against E.coli and closely related bacteria.
+
[https://www.uniprot.org/uniprot/CEA7_ECOLX CEA7_ECOLX] This plasmid-coded bactericidal protein is an endonuclease active on both single- and double-stranded DNA but with undefined specificity. Colicins are polypeptide toxins produced by and active against E.coli and closely related bacteria.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 36: Line 35:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Ecow3]]
+
[[Category: Escherichia coli str. K-12 substr. W3110]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Chak, K F]]
+
[[Category: Chak KF]]
-
[[Category: Cheng, Y S]]
+
[[Category: Cheng YS]]
-
[[Category: Hsia, K C]]
+
[[Category: Hsia KC]]
-
[[Category: Ku, W Y]]
+
[[Category: Ku WY]]
-
[[Category: Yuan, H S]]
+
[[Category: Yuan HS]]
-
[[Category: Colicin]]
+
-
[[Category: Endonuclease]]
+
-
[[Category: Hnh motif]]
+
-
[[Category: Hydrolase-dna complex]]
+
-
[[Category: Protein-dna complex]]
+

Current revision

Crystal structures of nuclease-ColE7 complexed with octamer DNA

PDB ID 1pt3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1pt3"
Personal tools