1q35
From Proteopedia
(Difference between revisions)
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<StructureSection load='1q35' size='340' side='right'caption='[[1q35]], [[Resolution|resolution]] 1.20Å' scene=''> | <StructureSection load='1q35' size='340' side='right'caption='[[1q35]], [[Resolution|resolution]] 1.20Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[1q35]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[1q35]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mannheimia_haemolytica Mannheimia haemolytica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Q35 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Q35 FirstGlance]. <br> |
- | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.2Å</td></tr> |
- | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1q35 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1q35 OCA], [https://pdbe.org/1q35 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1q35 RCSB], [https://www.ebi.ac.uk/pdbsum/1q35 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1q35 ProSAT]</span></td></tr> |
</table> | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/Q9Z4N6_MANHA Q9Z4N6_MANHA] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1q35 ConSurf]. | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1q35 ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
- | <div style="background-color:#fffaf0;"> | ||
- | == Publication Abstract from PubMed == | ||
- | Pasteurellosis caused by the Gram-negative pathogen Pasteurella haemolytica is a serious disease leading to death in cattle. To scavenge growth-limiting iron from the host, the pathogen utilizes the periplasmic ferric ion-binding protein A (PhFbpA) as a component of an ATP-binding cassette transport pathway. We report the 1.2-A structure of the iron-free (apo) form of PhFbpA, which is a member of the transferrin structural superfamily. The protein structure adopts a closed conformation, allowing us to reliably assign putative iron-coordinating residues. Based on our analysis, PhFbpA utilizes a unique constellation of binding site residues and anions to octahedrally coordinate an iron atom. A surprising finding in the structure is the presence of two formate anions on opposite sides of the iron-binding pocket. The formate ions tether the N- and C-terminal domains of the protein and stabilize the closed structure, also providing clues as to probable candidates for synergistic anions in the iron-loaded state. PhFbpA represents a new class of bacterial iron-binding proteins. | ||
- | |||
- | Crystal structure of Pasteurella haemolytica ferric ion-binding protein A reveals a novel class of bacterial iron-binding proteins.,Shouldice SR, Dougan DR, Williams PA, Skene RJ, Snell G, Scheibe D, Kirby S, Hosfield DJ, McRee DE, Schryvers AB, Tari LW J Biol Chem. 2003 Oct 17;278(42):41093-8. Epub 2003 Jul 25. PMID:12882966<ref>PMID:12882966</ref> | ||
- | |||
- | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
- | </div> | ||
- | <div class="pdbe-citations 1q35" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
*[[Ferric-binding protein|Ferric-binding protein]] | *[[Ferric-binding protein|Ferric-binding protein]] | ||
- | == References == | ||
- | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: Atcc 33396]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Dougan | + | [[Category: Mannheimia haemolytica]] |
- | [[Category: Kirby | + | [[Category: Dougan DR]] |
- | [[Category: McRee | + | [[Category: Kirby S]] |
- | [[Category: Scheibe | + | [[Category: McRee DE]] |
- | [[Category: Schryvers | + | [[Category: Scheibe D]] |
- | [[Category: Shouldice | + | [[Category: Schryvers AB]] |
- | [[Category: Skene | + | [[Category: Shouldice SR]] |
- | [[Category: Snell | + | [[Category: Skene RJ]] |
- | [[Category: Tari | + | [[Category: Snell G]] |
- | [[Category: Williams | + | [[Category: Tari LW]] |
- | + | [[Category: Williams PA]] | |
- | + |
Current revision
Crystal Structure of Pasteurella haemolytica Apo Ferric ion-Binding Protein A
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Categories: Large Structures | Mannheimia haemolytica | Dougan DR | Kirby S | McRee DE | Scheibe D | Schryvers AB | Shouldice SR | Skene RJ | Snell G | Tari LW | Williams PA