7byj

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Crystal structure of the FERM domain of FRMPD4==
==Crystal structure of the FERM domain of FRMPD4==
-
<StructureSection load='7byj' size='340' side='right'caption='[[7byj]]' scene=''>
+
<StructureSection load='7byj' size='340' side='right'caption='[[7byj]], [[Resolution|resolution]] 2.49&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7BYJ OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=7BYJ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[7byj]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7BYJ OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=7BYJ FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=7byj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7byj OCA], [http://pdbe.org/7byj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=7byj RCSB], [http://www.ebi.ac.uk/pdbsum/7byj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=7byj ProSAT]</span></td></tr>
+
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">FRMPD4, KIAA0316, PDZD10, PDZK10 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=7byj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7byj OCA], [http://pdbe.org/7byj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=7byj RCSB], [http://www.ebi.ac.uk/pdbsum/7byj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=7byj ProSAT]</span></td></tr>
</table>
</table>
 +
== Disease ==
 +
[[http://www.uniprot.org/uniprot/FRPD4_HUMAN FRPD4_HUMAN]] The disease is caused by mutations affecting the gene represented in this entry.
 +
== Function ==
 +
[[http://www.uniprot.org/uniprot/FRPD4_HUMAN FRPD4_HUMAN]] Positive regulator of dendritic spine morphogenesis and density. Required for the maintenance of excitatory synaptic transmission. Binds phosphatidylinositol 4,5-bisphosphate.<ref>PMID:19118189</ref>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Scaffold proteins play crucial roles in orchestrating synaptic signaling and plasticity in the excitatory synapses by providing a structural link between glutamatergic receptors, signaling molecules, and neuronal cytoskeletons. FRMPD4 is a neural scaffold protein that binds to metabotropic glutamate receptors via its FERM domain. Here, we determine the crystal structure of the FERM domain of FRMPD4 at 2.49 A resolution. The structure reveals that the canonical target binding groove of FRMPD4 FERM is occupied by a conserved fragment C-terminal to the FERM domain, suggesting that the FRMPD4-mGluR interaction may adopt a distinct binding mode. In addition, FRMPD4 FERM does not contain a typical phosphoinositide binding site at the F1/F3 cleft found in ERM family FERM domains, but it possesses a conserved basic residue cluster on the F2 lobe which could bind to lipid effectively. Finally, analysis of mutations that are associated with X-linked intellectual disability suggests that they may compromise the biological function of FRMPD4 by destabilizing the FERM structure.
 +
 +
Structure of the FERM domain of a neural scaffold protein FRMPD4 implicated in X-linked intellectual disability.,Wang M, Lin L, Shi Y, He L, Wang C, Zhu J Biochem J. 2020 Dec 11;477(23):4623-4634. doi: 10.1042/BCJ20200857. PMID:33216857<ref>PMID:33216857</ref>
 +
 +
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 7byj" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Human]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Lin L]]
+
[[Category: Lin, L]]
-
[[Category: Wang C]]
+
[[Category: Wang, C]]
-
[[Category: Wang M]]
+
[[Category: Wang, M]]
-
[[Category: Zhu J]]
+
[[Category: Zhu, J]]
 +
[[Category: Ferm]]
 +
[[Category: Frmpd4]]
 +
[[Category: Neural scaffold protein]]
 +
[[Category: Protein binding]]

Revision as of 07:04, 30 December 2020

Crystal structure of the FERM domain of FRMPD4

PDB ID 7byj

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools