User:Eric Martz/Sandbox 17

This page created 2020/12/16 after Jaim made changes to enable caption editing.

1. . This loads Image:6zgi-cavities.pngj

When scene 1 was re-loaded, the caption DID APPEAR for editing, but in JSmol, the isosurfaces from the PNGJ file were not displayed.

2. .

As in the SAT, the isosurfaces in the PNGJ file have disappeared. But the edited caption appears correctly.

2020-12-17:

3. , after further fixes by Jaim (2020-12-17).

BOTH SCENE AND CAPTION ARE CORRECT. HURRAY!

Scenes 4 and 5 use Image:6zgi-membrane-proximal-cavity-jmol-cr2.5.pngj.

4. . These isosurfaces take several minutes to calculate, but when saved as JVXL files, then loaded from the files and cached, and that saved into a new PNGJ file, the results appear in about one second!

2020-12-19:

5. This green link runs a JSmol script, loading the PNGJ file, and writing the caption directly.

I have not been able to devise a method to color text in the caption. Anything with < or > creates an XML error (page cannot be saved). Using e.g. &lt; can be saved, but confuses JSmol which expects a new command after the ';'.

Proteopedia's wiki lacks Template:Font_color: red text?.

6. I tried an indirect method to color caption text. This page saves in Proteopedia, and the JSmol variable captext prints correctly. I can't tell if my assignment to the Javascript variable captext is working. The caption does not display. There are no JSmol errors. There are Javascript warnings, but not errors.

2020-12-21:

7. (Image:6zgi-membrane-proximal-cavity-jmol-cr2.5.pngj). WORKS.

8. . WORKS WITH COLORED CAPTION. COLORS done with span classes.

9. . DOES NOT WORK.

10. . STILL DOES NOT WORK. Evidently style spans are not supported in captions.

11. . WORKS.

PDB (not PNGJ) scenes

12. . WORKS. FONT COLOR TAGS CAN BE USED IN SCENES NOT INVOLVING PNGJ FILES, BUT BE SURE TO DO BOLD/ITALICS WITH HTML TAGS NOT WIKI MARKUP!

13: .