This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


7k4u

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:17, 18 October 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='7k4u' size='340' side='right'caption='[[7k4u]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
<StructureSection load='7k4u' size='340' side='right'caption='[[7k4u]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[7k4u]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Theau Theau]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7K4U OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=7K4U FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[7k4u]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermoascus_aurantiacus Thermoascus aurantiacus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7K4U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7K4U FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6NT:6-NITROBENZOTRIAZOLE'>6NT</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">XYNA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5087 THEAU])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6NT:6-NITROBENZOTRIAZOLE'>6NT</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Endo-1,4-beta-xylanase Endo-1,4-beta-xylanase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.8 3.2.1.8] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7k4u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7k4u OCA], [https://pdbe.org/7k4u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7k4u RCSB], [https://www.ebi.ac.uk/pdbsum/7k4u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7k4u ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=7k4u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7k4u OCA], [http://pdbe.org/7k4u PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=7k4u RCSB], [http://www.ebi.ac.uk/pdbsum/7k4u PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=7k4u ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/XYNA_THEAU XYNA_THEAU]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 18: Line 19:
</div>
</div>
<div class="pdbe-citations 7k4u" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 7k4u" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Kemp eliminase|Kemp eliminase]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Endo-1,4-beta-xylanase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Theau]]
+
[[Category: Thermoascus aurantiacus]]
-
[[Category: Bunzel, A]]
+
[[Category: Bunzel A]]
-
[[Category: Cohen, A E]]
+
[[Category: Cohen AE]]
-
[[Category: Hilvert, D]]
+
[[Category: Hilvert D]]
-
[[Category: Kern, D]]
+
[[Category: Kern D]]
-
[[Category: Nguyen, V]]
+
[[Category: Nguyen V]]
-
[[Category: Otten, R]]
+
[[Category: Otten R]]
-
[[Category: Padua, R A.P]]
+
[[Category: Padua RAP]]
-
[[Category: Patterson, M]]
+
[[Category: Patterson M]]
-
[[Category: Perry, S L]]
+
[[Category: Perry SL]]
-
[[Category: Pitsawong, W]]
+
[[Category: Pitsawong W]]
-
[[Category: Sui, S]]
+
[[Category: Sui S]]
-
[[Category: Directed evolution]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Kemp elimination]]
+
-
[[Category: Transition state analog]]
+

Current revision

Crystal structure of Kemp Eliminase HG3 K50Q in complex with the transition state analog 6-nitrobenzotriazole

PDB ID 7k4u

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools