This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
Ubiquitin
From Proteopedia
(Difference between revisions)
| Line 63: | Line 63: | ||
**[[3wwq]] – hDiUBB + FAAP20 peptide <br /> | **[[3wwq]] – hDiUBB + FAAP20 peptide <br /> | ||
**[[5ohp]], [[5ohn]], [[5ohk]] – hDiUBB + USP30<br /> | **[[5ohp]], [[5ohn]], [[5ohk]] – hDiUBB + USP30<br /> | ||
| - | **[[ | + | **[[3ptf]], [[6if1]] – hDiUBB + UBB conjugating enzyme E2<br /> |
**[[3a1q]] – mDiUBB+UBB interaction motif-containing protein <br /> | **[[3a1q]] – mDiUBB+UBB interaction motif-containing protein <br /> | ||
**[[2znv]] – mDiUBB+hAMSH-like protease<br /> | **[[2znv]] – mDiUBB+hAMSH-like protease<br /> | ||
| - | **[[ | + | **[[2kde]], [[2kdf]] – fDiUBB+26S proteasome non-ATPase regulatory subunit - NMR<br /> |
* Ubiquitin trimer | * Ubiquitin trimer | ||
| Line 121: | Line 121: | ||
**[[3ofi]] – hUBB+insulin protease | **[[3ofi]] – hUBB+insulin protease | ||
| - | **[[3i3t]], [[2ibi]], [[2ayo]], [[1nbf]], [[2wdt]], [[4i6l]], [[4i6n]], [[4ig7]], [[5l8h]], [[5jtj]], [[5cvm]], [[6crn]] - hUBB+hUBB carboxyl-terminal hydrolase catalytic domain<br /> | + | **[[3i3t]], [[2ibi]], [[2ayo]], [[1nbf]], [[2wdt]], [[4i6l]], [[4i6n]], [[4ig7]], [[5l8h]], [[5jtj]], [[5cvm]], [[6crn]], [[6ml1]] - hUBB+hUBB carboxyl-terminal hydrolase catalytic domain<br /> |
**[[3n3k]], [[3ifw]], [[3kvf]], [[3kw5]], [[3irt]], [[3mtn]], [[3ihp]], [[3v6c]], [[3v6e]]– hUBB (mutant)+hUBB carboxyl-terminal esterase catalytic domain<br /> | **[[3n3k]], [[3ifw]], [[3kvf]], [[3kw5]], [[3irt]], [[3mtn]], [[3ihp]], [[3v6c]], [[3v6e]]– hUBB (mutant)+hUBB carboxyl-terminal esterase catalytic domain<br /> | ||
**[[5l8w]], [[5cvn]], [[5cvo]] – hUBB + UBB carboxy terminal hydrolase 12 + WD repeat containing protein 48<br /> | **[[5l8w]], [[5cvn]], [[5cvo]] – hUBB + UBB carboxy terminal hydrolase 12 + WD repeat containing protein 48<br /> | ||
| Line 175: | Line 175: | ||
**[[4msq]], [[4msm]] – hUBB + AMSH-like protease<br /> | **[[4msq]], [[4msm]] – hUBB + AMSH-like protease<br /> | ||
**[[6upu]] – hUBB + otDUB<br /> | **[[6upu]] – hUBB + otDUB<br /> | ||
| + | **[[6ttu]] – hUBB in cullin-ring-ube2d assembly - Cryo EM<br /> | ||
**[[4m0w]] – bUBB + replicase polyprotein<br /> | **[[4m0w]] – bUBB + replicase polyprotein<br /> | ||
**[[1uzx]] – bUBB+VPS23 UEV<br /> | **[[1uzx]] – bUBB+VPS23 UEV<br /> | ||
| Line 198: | Line 199: | ||
**[[1fxt]], [[3oj4]], [[3ugb]], [[5dfl]], [[3k9p]], [[3a33]], [[5ulf]], [[5tut]], [[6nyo]] – hUBB + UBB conjugating enzyme E2<br /> | **[[1fxt]], [[3oj4]], [[3ugb]], [[5dfl]], [[3k9p]], [[3a33]], [[5ulf]], [[5tut]], [[6nyo]] – hUBB + UBB conjugating enzyme E2<br /> | ||
| - | **[[5bnb]], [[2kjh]], [[1zgu]], [[6d4p]] – hUBB (mutant) + UBB conjugating enzyme E2<br /> | + | **[[5bnb]], [[2kjh]], [[1zgu]], [[6d4p]], [[6d6i]] – hUBB (mutant) + UBB conjugating enzyme E2<br /> |
**[[5edv]], [[4whv]], [[5ait]], [[5aiu]], [[3jvz]], [[3jw0]], [[5udh]], [[5tte]] – hUBB + UBB conjugating enzyme E2 + E3 UBB-protein ligase<br /> | **[[5edv]], [[4whv]], [[5ait]], [[5aiu]], [[3jvz]], [[3jw0]], [[5udh]], [[5tte]] – hUBB + UBB conjugating enzyme E2 + E3 UBB-protein ligase<br /> | ||
**[[2gmi]] – hUBB + UBB conjugating enzyme E2<br /> | **[[2gmi]] – hUBB + UBB conjugating enzyme E2<br /> | ||
Revision as of 17:03, 31 December 2020
| |||||||||||
3D Structures of Ubiquitin
Updated on 31-December-2020
References
- ↑ Hershko A, Ciechanover A. The ubiquitin system. Annu Rev Biochem. 1998;67:425-79. PMID:9759494 doi:http://dx.doi.org/10.1146/annurev.biochem.67.1.425
- ↑ Paul S. Dysfunction of the ubiquitin-proteasome system in multiple disease conditions: therapeutic approaches. Bioessays. 2008 Nov;30(11-12):1172-84. doi: 10.1002/bies.20852. PMID:18937370 doi:http://dx.doi.org/10.1002/bies.20852
Proteopedia Page Contributors and Editors (what is this?)
Michal Harel, Alexander Berchansky, Joel L. Sussman, David Canner, Jaime Prilusky
