Sandbox Reserved 1645
From Proteopedia
(Difference between revisions)
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You may include any references to papers as in: the use of JSmol in Proteopedia <ref>DOI 10.1002/ijch.201300024</ref> or to the article describing Jmol <ref>PMID:21638687</ref> to the rescue. | You may include any references to papers as in: the use of JSmol in Proteopedia <ref>DOI 10.1002/ijch.201300024</ref> or to the article describing Jmol <ref>PMID:21638687</ref> to the rescue. | ||
- | Fibrillin-1 (PDB ID: 2W86) | + | Fibrillin-1 (PDB ID: 2W86) is a protein which is encoded in human bodies by the gene FBN1 situated on chromosome 15. Fibrillin-1 is a single protein chain of 230kb involving 65 exons from the glycoproteins' class with a mass of 350 kDa. The protein forms microfibrils located in the extracellular matrix, and thus has a role in the structural support of cells in elastic and nonelastic connective tissues in the human body. |
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== Disease caused by mutation == | == Disease caused by mutation == | ||
- | The[https://en.wikipedia.org/wiki/Marfan_syndrome Marfan syndrome (MFS)] is a genetic disorder due to a mutation of the Fibrillin1 gene. Because Fibrillin1 is found in connective tissues, having this syndrome can cause severe damages to the ocular, skeletal and cardiovascular systems by affecting the organs’ tissues. Indeed, with fragile connective tissues due to bad synthesized microfibrils, the aorta can be deformed which can provoke an internal bleeding, and lead to death. | + | The [https://en.wikipedia.org/wiki/Marfan_syndrome Marfan syndrome (MFS)] is a genetic disorder due to a mutation of the Fibrillin1 gene. Because Fibrillin1 is found in connective tissues, having this syndrome can cause severe damages to the ocular, skeletal and cardiovascular systems by affecting the organs’ tissues. Indeed, with fragile connective tissues due to bad synthesized microfibrils, the aorta can be deformed which can provoke an internal bleeding, and lead to death. |
- | It exists nearly a 1 000 of different mutations on this gene but the most common one is a substitution of a guanine by a thymine at the 1538 nucleotide of the transcript. This type of mutation leads to a non-synonymous amino acid substitution Cys (cysteine) to Phe (phenylalanine) at the 528 position on the fibrillin1 gene. Because this cysteine is present in the calcium binding domain's polypetide chain the epidermal growth factor-like domain's structure of FBN1 is modified by affecting the | + | It exists nearly a 1 000 of different mutations on this gene but the most common one is a substitution of a guanine by a thymine at the 1538 nucleotide of the transcript. This type of mutation leads to a non-synonymous amino acid substitution Cys (cysteine) to Phe (phenylalanine) at the 528 position on the fibrillin1 gene. Because this cysteine is present in the calcium binding domain's polypetide chain the epidermal growth factor-like domain's structure of FBN1 is modified by affecting the <scene name='86/868178/Disulfide_bridges/1'> disulfide bridge </scene> . The calcium cation cannot bind properly to the <scene name='86/868178/Ca_binding_site/1'> cb-EGF unit </scene> and therefore there is no stabilization of cb-EGF interdomain which causes defects in connective tissue. We can thus detect the marfan syndrome by an increase of TGF β in the blood because the factors cannot bind to the proteine due to a change in the binding domain's structure. |
Other diseases can occur by the substitution of other cysteines of the FBN1 transcript such as C1-C2, or C3-C4. But the consequences of these diseases are much more severe. It shows the importance of the cysteines localization for the proteine's structure. Also, a mutation of the [https://en.wikipedia.org/wiki/TGF_beta_receptor_2 TGFBR2] gene coding for the TGF β has been found and can cause the "Type 2 Marfan syndrome". But not much has been disovered on the subject yet. | Other diseases can occur by the substitution of other cysteines of the FBN1 transcript such as C1-C2, or C3-C4. But the consequences of these diseases are much more severe. It shows the importance of the cysteines localization for the proteine's structure. Also, a mutation of the [https://en.wikipedia.org/wiki/TGF_beta_receptor_2 TGFBR2] gene coding for the TGF β has been found and can cause the "Type 2 Marfan syndrome". But not much has been disovered on the subject yet. |
Revision as of 19:00, 7 January 2021
This Sandbox is Reserved from 26/11/2020, through 26/11/2021 for use in the course "Structural Biology" taught by Bruno Kieffer at the University of Strasbourg, ESBS. This reservation includes Sandbox Reserved 1643 through Sandbox Reserved 1664. |
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Fibrillin - 1
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References
- ↑ Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
- ↑ Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644