This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
7lgp
From Proteopedia
(Difference between revisions)
m (Protected "7lgp" [edit=sysop:move=sysop]) |
|||
| Line 1: | Line 1: | ||
==DapE enzyme from Shigella flexneri== | ==DapE enzyme from Shigella flexneri== | ||
| - | <StructureSection load='7lgp' size='340' side='right'caption='[[7lgp]]' scene=''> | + | <StructureSection load='7lgp' size='340' side='right'caption='[[7lgp]], [[Resolution|resolution]] 1.91Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7LGP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7LGP FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7lgp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Shigella_flexneri_2a_str._301 Shigella flexneri 2a str. 301]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7LGP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7LGP FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7lgp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7lgp OCA], [https://pdbe.org/7lgp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7lgp RCSB], [https://www.ebi.ac.uk/pdbsum/7lgp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7lgp ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.91Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7lgp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7lgp OCA], [https://pdbe.org/7lgp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7lgp RCSB], [https://www.ebi.ac.uk/pdbsum/7lgp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7lgp ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/DAPE_SHIFL DAPE_SHIFL] Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls.[HAMAP-Rule:MF_01690] | ||
| + | |||
| + | ==See Also== | ||
| + | *[[MHC 3D structures|MHC 3D structures]] | ||
| + | *[[MHC I 3D structures|MHC I 3D structures]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| + | [[Category: Shigella flexneri 2a str. 301]] | ||
[[Category: Becker DP]] | [[Category: Becker DP]] | ||
[[Category: Endres M]] | [[Category: Endres M]] | ||
[[Category: Joachimiak A]] | [[Category: Joachimiak A]] | ||
[[Category: Osipiuk J]] | [[Category: Osipiuk J]] | ||
Current revision
DapE enzyme from Shigella flexneri
| |||||||||||
