6sr8
From Proteopedia
(Difference between revisions)
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==Crystal structure of glutathione transferase Omega 2C from Trametes versicolor== | ==Crystal structure of glutathione transferase Omega 2C from Trametes versicolor== | ||
| - | <StructureSection load='6sr8' size='340' side='right'caption='[[6sr8]]' scene=''> | + | <StructureSection load='6sr8' size='340' side='right'caption='[[6sr8]], [[Resolution|resolution]] 1.94Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6SR8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6SR8 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6sr8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Trametes_versicolor_FP-101664_SS1 Trametes versicolor FP-101664 SS1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6SR8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6SR8 FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6sr8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6sr8 OCA], [https://pdbe.org/6sr8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6sr8 RCSB], [https://www.ebi.ac.uk/pdbsum/6sr8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6sr8 ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.94Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GSH:GLUTATHIONE'>GSH</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6sr8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6sr8 OCA], [https://pdbe.org/6sr8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6sr8 RCSB], [https://www.ebi.ac.uk/pdbsum/6sr8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6sr8 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/R7S7J5_TRAVS R7S7J5_TRAVS] | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | The Omega class of glutathione transferases (GSTs) forms a distinct class within the cytosolic GST superfamily because most of them possess a catalytic cysteine residue. The human GST Omega 1 isoform was first characterized twenty years ago, but it took years of work to clarify the roles of the human isoforms. Concerning the kingdom of fungi, little is known about the cellular functions of Omega glutathione transferases (GSTOs), although they are widely represented in some of these organisms. In this study, we re-assess the phylogeny and the classification of GSTOs based on 240 genomes of mushroom-forming fungi (Agaricomycetes). We observe that the number of GSTOs is not only extended in the order of Polyporales but also in other orders such as Boletales. Our analysis leads to a new classification in which the fungal GSTOs are divided into two Types A and B. The catalytic residue of Type-A is either cysteine or serine, while that of Type-B is cysteine. The present study focuses on Trametes versicolor GSTO isoforms that possess a catalytic cysteine residue. Transcriptomic data show that Type-A GSTOs are constitutive enzymes while Type-B are inducible ones. The crystallographic analysis reveals substantial structural differences between the two types while they have similar biochemical profiles in the tested conditions. Additionally, these enzymes have the ability to bind antioxidant molecules such as wood polyphenols in two possible binding sites as observed from X-ray structures. The multiplication of GSTOs could allow fungal organisms to adapt more easily to new environments. | ||
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| + | Diversity of Omega Glutathione Transferases in mushroom-forming fungi revealed by phylogenetic, transcriptomic, biochemical and structural approaches.,Perrot T, Schwartz M, Deroy A, Girardet JM, Kohler A, Morel-Rouhier M, Favier F, Gelhaye E, Didierjean C Fungal Genet Biol. 2021 Jan 12;148:103506. doi: 10.1016/j.fgb.2020.103506. PMID:33450403<ref>PMID:33450403</ref> | ||
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| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 6sr8" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| + | [[Category: Trametes versicolor FP-101664 SS1]] | ||
[[Category: Didierjean C]] | [[Category: Didierjean C]] | ||
[[Category: Favier F]] | [[Category: Favier F]] | ||
[[Category: Schwartz M]] | [[Category: Schwartz M]] | ||
Current revision
Crystal structure of glutathione transferase Omega 2C from Trametes versicolor
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