2dz9

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Current revision (08:32, 25 October 2023) (edit) (undo)
 
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<StructureSection load='2dz9' size='340' side='right'caption='[[2dz9]], [[Resolution|resolution]] 1.84&Aring;' scene=''>
<StructureSection load='2dz9' size='340' side='right'caption='[[2dz9]], [[Resolution|resolution]] 1.84&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2dz9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/'pyrococcus_shinkaii' 'pyrococcus shinkaii']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DZ9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DZ9 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2dz9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DZ9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DZ9 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BT5:BIOTINYL-5-AMP'>BT5</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.84&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2dxt|2dxt]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BT5:BIOTINYL-5-AMP'>BT5</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">birA ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=53953 'Pyrococcus shinkaii'])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Biotin--[acetyl-CoA-carboxylase]_ligase Biotin--[acetyl-CoA-carboxylase] ligase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.3.4.15 6.3.4.15] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dz9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dz9 OCA], [https://pdbe.org/2dz9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dz9 RCSB], [https://www.ebi.ac.uk/pdbsum/2dz9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dz9 ProSAT], [https://www.topsan.org/Proteins/RSGI/2dz9 TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dz9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dz9 OCA], [https://pdbe.org/2dz9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dz9 RCSB], [https://www.ebi.ac.uk/pdbsum/2dz9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dz9 ProSAT], [https://www.topsan.org/Proteins/RSGI/2dz9 TOPSAN]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/O57883_PYRHO O57883_PYRHO]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Pyrococcus shinkaii]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Bagautdinov, B]]
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[[Category: Pyrococcus horikoshii]]
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[[Category: Kunishima, N]]
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[[Category: Bagautdinov B]]
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[[Category: Matsuura, Y]]
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[[Category: Kunishima N]]
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[[Category: Structural genomic]]
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[[Category: Matsuura Y]]
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[[Category: Biotin biosynthesis]]
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[[Category: Dimer]]
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[[Category: Ligase]]
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[[Category: National project on protein structural and functional analyse]]
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[[Category: Nppsfa]]
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[[Category: Rsgi]]
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Current revision

Crystal Structure Of Biotin Protein Ligase From Pyrococcus Horikoshii Complexed with biotinyl-5'-AMP, Mutation D104A

PDB ID 2dz9

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