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2f67

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Current revision (07:43, 23 August 2023) (edit) (undo)
 
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<StructureSection load='2f67' size='340' side='right'caption='[[2f67]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
<StructureSection load='2f67' size='340' side='right'caption='[[2f67]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2f67]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Trypanosoma_(trypanozoon)_brucei Trypanosoma (trypanozoon) brucei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F67 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2F67 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2f67]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Trypanosoma_brucei Trypanosoma brucei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F67 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2F67 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=12B:BENZO[CD]INDOL-2(1H)-ONE'>12B</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=12B:BENZO[CD]INDOL-2(1H)-ONE'>12B</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2a0k|2a0k]], [[2f2t|2f2t]], [[2f62|2f62]], [[2f64|2f64]]</div></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Tb05.30H13.400 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5691 Trypanosoma (Trypanozoon) brucei])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Nucleoside_deoxyribosyltransferase Nucleoside deoxyribosyltransferase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.6 2.4.2.6] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2f67 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2f67 OCA], [https://pdbe.org/2f67 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2f67 RCSB], [https://www.ebi.ac.uk/pdbsum/2f67 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2f67 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2f67 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2f67 OCA], [https://pdbe.org/2f67 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2f67 RCSB], [https://www.ebi.ac.uk/pdbsum/2f67 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2f67 ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q57VC7_TRYB2 Q57VC7_TRYB2]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Nucleoside deoxyribosyltransferase]]
 
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[[Category: Bosch, J]]
 
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[[Category: Hol, W G.J]]
 
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[[Category: Robien, M A]]
 
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[[Category: Structural genomic]]
 
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[[Category: Nucleoside 2-deoxyribosyltransferase]]
 
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[[Category: PSI, Protein structure initiative]]
 
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[[Category: Sgpp]]
 
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[[Category: Transferase]]
 
[[Category: Trypanosoma brucei]]
[[Category: Trypanosoma brucei]]
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[[Category: Bosch J]]
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[[Category: Hol WGJ]]
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[[Category: Robien MA]]

Current revision

Crystal structure of Nucleoside 2-deoxyribosyltransferase from Trypanosoma brucei at 1.6 A resolution with BENZO[CD]INDOL-2(1H)-ONE bound

PDB ID 2f67

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