This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


7a5z

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:04, 1 February 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='7a5z' size='340' side='right'caption='[[7a5z]], [[Resolution|resolution]] 1.29&Aring;' scene=''>
<StructureSection load='7a5z' size='340' side='right'caption='[[7a5z]], [[Resolution|resolution]] 1.29&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[7a5z]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7A5Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7A5Z FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[7a5z]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7A5Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7A5Z FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=QZH:(5~{Z})-2-[1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-5-(4-oxidanylbutylidene)-2~{H}-1,3-thiazole-4-carboxylic+acid'>QZH</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.29&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=QZH:(5~{Z})-2-[1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-5-(4-oxidanylbutylidene)-2~{H}-1,3-thiazole-4-carboxylic+acid'>QZH</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7a5z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7a5z OCA], [https://pdbe.org/7a5z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7a5z RCSB], [https://www.ebi.ac.uk/pdbsum/7a5z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7a5z ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7a5z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7a5z OCA], [https://pdbe.org/7a5z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7a5z RCSB], [https://www.ebi.ac.uk/pdbsum/7a5z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7a5z ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9K2N0_PSEAI Q9K2N0_PSEAI]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 24:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Lucic, A]]
+
[[Category: Pseudomonas aeruginosa]]
-
[[Category: Schofield, C J]]
+
[[Category: Lucic A]]
-
[[Category: Antimicrobial protein]]
+
[[Category: Schofield CJ]]
-
[[Category: Antimicrobial resistance]]
+
-
[[Category: Carbapenem]]
+
-
[[Category: Faropenem]]
+
-
[[Category: Metallo-beta-lactamase]]
+
-
[[Category: Penem]]
+
-
[[Category: Vim-2]]
+

Current revision

Structure of VIM-2 metallo-beta-lactamase with hydrolysed Faropenem imine product

PDB ID 7a5z

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools