2fu5

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Current revision (08:45, 25 October 2023) (edit) (undo)
 
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<StructureSection load='2fu5' size='340' side='right'caption='[[2fu5]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='2fu5' size='340' side='right'caption='[[2fu5]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2fu5]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human] and [https://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FU5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FU5 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2fu5]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FU5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FU5 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RABIF, MSS4, RASGRF3 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN]), Rab8a, Mel, Rab8 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fu5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fu5 OCA], [https://pdbe.org/2fu5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fu5 RCSB], [https://www.ebi.ac.uk/pdbsum/2fu5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fu5 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fu5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fu5 OCA], [https://pdbe.org/2fu5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fu5 RCSB], [https://www.ebi.ac.uk/pdbsum/2fu5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fu5 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/MSS4_HUMAN MSS4_HUMAN]] Guanine-nucleotide-releasing protein that acts on members of the SEC4/YPT1/RAB subfamily. Stimulates GDP release from both YPT1 and RAB3A, but is less active on these proteins than on the SEC4 protein. Might play a general role in vesicular transport. [[https://www.uniprot.org/uniprot/RAB8A_MOUSE RAB8A_MOUSE]] May be involved in vesicular trafficking and neurotransmitter release. Together with RAB11A, RAB3IP, the exocyst complex, PARD3, PRKCI, ANXA2, CDC42 and DNMBP promotes transcytosis of PODXL to the apical membrane initiation sites (AMIS), apical surface formation and lumenogenesis. Together with MYO5B and RAB11A participates in epithelial cell polarization (By similarity).
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[https://www.uniprot.org/uniprot/MSS4_HUMAN MSS4_HUMAN] Guanine-nucleotide-releasing protein that acts on members of the SEC4/YPT1/RAB subfamily. Stimulates GDP release from both YPT1 and RAB3A, but is less active on these proteins than on the SEC4 protein. Might play a general role in vesicular transport.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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</div>
</div>
<div class="pdbe-citations 2fu5" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 2fu5" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Ras-related protein Rab 3D structures|Ras-related protein Rab 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Human]]
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[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Lk3 transgenic mice]]
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[[Category: Mus musculus]]
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[[Category: Goody, R S]]
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[[Category: Goody RS]]
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[[Category: Itzen, A]]
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[[Category: Itzen A]]
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[[Category: Pylypenko, O]]
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[[Category: Pylypenko O]]
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[[Category: Rak, A]]
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[[Category: Rak A]]
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[[Category: Gef:gtpase nucleotide free complex]]
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[[Category: Mss4:rab8 protein complex]]
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[[Category: Nucleotide exchange via unfolding of nucleotide binding region]]
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[[Category: Signaling protein]]
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Current revision

structure of Rab8 in complex with MSS4

PDB ID 2fu5

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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