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4c13

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Current revision (10:28, 21 December 2022) (edit) (undo)
 
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<StructureSection load='4c13' size='340' side='right'caption='[[4c13]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
<StructureSection load='4c13' size='340' side='right'caption='[[4c13]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[4c13]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"micrococcus_aureus"_(rosenbach_1884)_zopf_1885 "micrococcus aureus" (rosenbach 1884) zopf 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4C13 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4C13 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[4c13]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4C13 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4C13 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=UML:URIDINE+5DIPHOSPHO+N-ACETYL+MURAMOYL-L-ALANYL-D-GLUTAMYL-L-LYSINE'>UML</scene></td></tr>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=KCX:LYSINE+NZ-CARBOXYLIC+ACID'>KCX</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=UML:URIDINE+5DIPHOSPHO+N-ACETYL+MURAMOYL-L-ALANYL-D-GLUTAMYL-L-LYSINE'>UML</scene></td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=KCX:LYSINE+NZ-CARBOXYLIC+ACID'>KCX</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[4c12|4c12]]</div></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine_ligase UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.3.2.7 6.3.2.7] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4c13 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4c13 OCA], [https://pdbe.org/4c13 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4c13 RCSB], [https://www.ebi.ac.uk/pdbsum/4c13 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4c13 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4c13 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4c13 OCA], [https://pdbe.org/4c13 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4c13 RCSB], [https://www.ebi.ac.uk/pdbsum/4c13 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4c13 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/D4U2M7_STAAU D4U2M7_STAAU]] Catalyzes the addition of L-lysine to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan (By similarity).[HAMAP-Rule:MF_00208]
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[https://www.uniprot.org/uniprot/MURE_STAA8 MURE_STAA8] Catalyzes the addition of L-lysine to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Can not use diaminopimelate as substrate. Seems to have a role in beta-lactam antibiotic resistance.<ref>PMID:14114846</ref> <ref>PMID:10498701</ref> <ref>PMID:14996801</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase]]
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[[Category: Staphylococcus aureus]]
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[[Category: Barreteau, H]]
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[[Category: Barreteau H]]
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[[Category: Blanot, D]]
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[[Category: Blanot D]]
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[[Category: Boniface, A]]
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[[Category: Boniface A]]
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[[Category: Dementin, S]]
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[[Category: Dementin S]]
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[[Category: Dessen, A]]
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[[Category: Dessen A]]
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[[Category: Dowson, C G]]
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[[Category: Dowson CG]]
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[[Category: Fulop, V]]
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[[Category: Fulop V]]
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[[Category: Gobec, S]]
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[[Category: Gobec S]]
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[[Category: Lloyd, A J]]
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[[Category: Lloyd AJ]]
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[[Category: Mengin-Lecreulx, D]]
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[[Category: Mengin-Lecreulx D]]
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[[Category: Roper, D I]]
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[[Category: Roper DI]]
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[[Category: Ruane, K M]]
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[[Category: Ruane KM]]
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[[Category: Ligase]]
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[[Category: Mure]]
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Current revision

x-ray crystal structure of Staphylococcus aureus MurE with UDP-MurNAc- Ala-Glu-Lys

PDB ID 4c13

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