2h1v

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:50, 30 August 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='2h1v' size='340' side='right'caption='[[2h1v]], [[Resolution|resolution]] 1.20&Aring;' scene=''>
<StructureSection load='2h1v' size='340' side='right'caption='[[2h1v]], [[Resolution|resolution]] 1.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2h1v]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"vibrio_subtilis"_ehrenberg_1835 "vibrio subtilis" ehrenberg 1835]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2H1V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2H1V FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2h1v]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2H1V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2H1V FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.2&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1doz|1doz]], [[2ac2|2ac2]], [[2ac4|2ac4]], [[2h1w|2h1w]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">hemH, hemF ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Vibrio subtilis" Ehrenberg 1835])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Ferrochelatase Ferrochelatase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.99.1.1 4.99.1.1] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2h1v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2h1v OCA], [https://pdbe.org/2h1v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2h1v RCSB], [https://www.ebi.ac.uk/pdbsum/2h1v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2h1v ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2h1v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2h1v OCA], [https://pdbe.org/2h1v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2h1v RCSB], [https://www.ebi.ac.uk/pdbsum/2h1v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2h1v ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/HEMH_BACSU HEMH_BACSU]] Catalyzes the ferrous insertion into protoporphyrin IX.
+
[https://www.uniprot.org/uniprot/CPFC_BACSU CPFC_BACSU] Involved in coproporphyrin-dependent heme b biosynthesis (PubMed:25646457, PubMed:25908396). Catalyzes the insertion of ferrous iron into coproporphyrin III to form Fe-coproporphyrin III (PubMed:25646457, PubMed:25908396). It can also insert iron into protoporphyrin IX (PubMed:1459957, PubMed:8119288, PubMed:21052751, PubMed:25646457). Has weaker activity with 2,4 disulfonate, deuteroporphyrin and 2,4 hydroxyethyl (PubMed:25646457, PubMed:12761666). In vitro, can also use Zn(2+) or Cu(2+) (PubMed:8119288, PubMed:16140324, PubMed:21052751, PubMed:12761666).<ref>PMID:12761666</ref> <ref>PMID:1459957</ref> <ref>PMID:16140324</ref> <ref>PMID:21052751</ref> <ref>PMID:25646457</ref> <ref>PMID:25826316</ref> <ref>PMID:25908396</ref> <ref>PMID:8119288</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 38: Line 36:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Vibrio subtilis ehrenberg 1835]]
+
[[Category: Bacillus subtilis]]
-
[[Category: Ferrochelatase]]
+
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Al-Karadaghi, S]]
+
[[Category: Al-Karadaghi S]]
-
[[Category: Hansson, M]]
+
[[Category: Arys Rahardja M]]
-
[[Category: Hansson, M D]]
+
[[Category: Hansson M]]
-
[[Category: Karlberg, T]]
+
[[Category: Hansson MD]]
-
[[Category: Rahardja, M Arys]]
+
[[Category: Karlberg T]]
-
[[Category: Lyase]]
+
-
[[Category: Pi-helix]]
+
-
[[Category: Rossmann fold]]
+

Current revision

Crystal structure of the Lys87Ala mutant variant of Bacillus subtilis ferrochelatase

PDB ID 2h1v

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools