User:Kaitlyn Roberts/Sandbox 2
From Proteopedia
(Difference between revisions)
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Sterol O-acyltransferase(SOAT), otherwise known as Acyl-coenzyme A:cholesterol acyltransferase(ACAT), is the founding member of the membrane-bound O-acyl [https://en.wikipedia.org/wiki/Transferase transferase](MBOAT) enzyme family. MBOAT enzymes transfer [https://en.wikipedia.org/wiki/Acyl_group acyl chains] onto various substrates, including lipids, peptides, and small proteins. There are 11 MBOAT family members in humans, which participate in a variety of physiological processes.<ref name="Guan">PMID:32424158</ref> | Sterol O-acyltransferase(SOAT), otherwise known as Acyl-coenzyme A:cholesterol acyltransferase(ACAT), is the founding member of the membrane-bound O-acyl [https://en.wikipedia.org/wiki/Transferase transferase](MBOAT) enzyme family. MBOAT enzymes transfer [https://en.wikipedia.org/wiki/Acyl_group acyl chains] onto various substrates, including lipids, peptides, and small proteins. There are 11 MBOAT family members in humans, which participate in a variety of physiological processes.<ref name="Guan">PMID:32424158</ref> | ||
- | SOAT specifically catalyzes the [https://en.wikipedia.org/wiki/Fischer–Speier_esterification esterification] of | + | SOAT specifically catalyzes the [https://en.wikipedia.org/wiki/Fischer–Speier_esterification esterification] of cholesterol for efficient storage within the cell. <scene name='87/877559/Cholesterol/5'>Cholesterol</scene> is a membrane lipid that plays an essential role in maintaining the fluidity and integrity of the membrane, and [https://en.wikipedia.org/wiki/Cholesteryl_ester cholesteryl esters] are formed when an excess of cholesterol is present. |
== Structure == | == Structure == | ||
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=== Active Site === | === Active Site === | ||
- | The <scene name='87/ | + | The <scene name='87/877555/As_residues/4'>active site</scene> of this enzyme has 3 main residues that are essential for the catalytic activity of SOAT. <scene name='87/877555/As_acylcoa_interaction/1'>H460, W420, and N421</scene> work to stabilize the substrates as well as serve other roles in the mechanism of action. Many acyl transferases utilize histidine as the catalytic base. The conserved H460 is crucial for SOAT activity and is the putative catalytic residue. A single point mutation of the histidine at position 460 to alanine resulted in the complete abolition of enzymatic activity indicating its essential role in the mechanism. Along with H460, there are several other residues in the central cavity that are important for SOAT function. Most residues aligning the interior of the reaction chamber are highly conserved indicating that the local environment in the central cavity is important for the catalytic reaction. |
=== Tunnel System === | === Tunnel System === | ||
== Catalytic Mechanism == | == Catalytic Mechanism == | ||
- | The distal-most nitrogen on H460 acts as a base catalyst to deprotonate the hydroxyl group of a cholesterol molecule. This leaves the cholesterol oxygen with a negative charge, making it a good nucleophile. The nucleophilic oxygen attacks the | + | The distal-most nitrogen on H460 acts as a base catalyst to deprotonate the hydroxyl group of a cholesterol molecule. This leaves the cholesterol oxygen with a negative charge, making it a good nucleophile. The nucleophilic oxygen attacks the Acyl CoA substrate at the carbonyl carbon, kicking electron density up to the carbonyl oxygen. Shown in brackets, the transition state is stabilized by N421 and newly protonated H460. |
[[Image:SOATmech1.png|400 px|right|thumb|Figure 1. Mech 1]] | [[Image:SOATmech1.png|400 px|right|thumb|Figure 1. Mech 1]] | ||
From the transition state, excess electron density on the carbonyl oxygen is collapsed back into a double bond. This causes the bond between the carbonyl carbon and sulfur to break, shifting electron density to the sulfur atom. To complete the mechanism, the negatively charged sulfur would reclaim the hydrogen from protonated H460. Acyl CoA would exit the active site as a leaving group, leaving its R group attached to cholesterol in the form of a cholesterol ester. | From the transition state, excess electron density on the carbonyl oxygen is collapsed back into a double bond. This causes the bond between the carbonyl carbon and sulfur to break, shifting electron density to the sulfur atom. To complete the mechanism, the negatively charged sulfur would reclaim the hydrogen from protonated H460. Acyl CoA would exit the active site as a leaving group, leaving its R group attached to cholesterol in the form of a cholesterol ester. |
Revision as of 13:56, 6 April 2021
Human Sterol O-acyltransferase
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References
- ↑ Guan C, Niu Y, Chen SC, Kang Y, Wu JX, Nishi K, Chang CCY, Chang TY, Luo T, Chen L. Structural insights into the inhibition mechanism of human sterol O-acyltransferase 1 by a competitive inhibitor. Nat Commun. 2020 May 18;11(1):2478. doi: 10.1038/s41467-020-16288-4. PMID:32424158 doi:http://dx.doi.org/10.1038/s41467-020-16288-4
- ↑ Qian H, Zhao X, Yan R, Yao X, Gao S, Sun X, Du X, Yang H, Wong CCL, Yan N. Structural basis for catalysis and substrate specificity of human ACAT1. Nature. 2020 May;581(7808):333-338. doi: 10.1038/s41586-020-2290-0. Epub 2020 May, 13. PMID:32433614 doi:http://dx.doi.org/10.1038/s41586-020-2290-0
Student Contributors
- Kylie Pfifer
- Stepahnie Pellegrino
- Kaitlyn Roberts