This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2k0c

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (19:08, 29 May 2024) (edit) (undo)
 
Line 1: Line 1:
==Zinc-finger 2 of Nup153==
==Zinc-finger 2 of Nup153==
-
<StructureSection load='2k0c' size='340' side='right'caption='[[2k0c]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
+
<StructureSection load='2k0c' size='340' side='right'caption='[[2k0c]]' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2k0c]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K0C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2K0C FirstGlance]. <br>
<table><tr><td colspan='2'>[[2k0c]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K0C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2K0C FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Nup153 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10116 Rattus norvegicus])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2k0c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k0c OCA], [https://pdbe.org/2k0c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2k0c RCSB], [https://www.ebi.ac.uk/pdbsum/2k0c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2k0c ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2k0c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k0c OCA], [https://pdbe.org/2k0c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2k0c RCSB], [https://www.ebi.ac.uk/pdbsum/2k0c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2k0c ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/NU153_RAT NU153_RAT]] Possible DNA-binding subunit of the nuclear pore complex (NPC). The repeat-containing domain may be involved in anchoring components of the pore complex to the pore membrane.
+
[https://www.uniprot.org/uniprot/NU153_RAT NU153_RAT] Possible DNA-binding subunit of the nuclear pore complex (NPC). The repeat-containing domain may be involved in anchoring components of the pore complex to the pore membrane.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 38: Line 38:
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Rattus norvegicus]]
[[Category: Rattus norvegicus]]
-
[[Category: Bangert, J A]]
+
[[Category: Bangert JA]]
-
[[Category: Schrader, N]]
+
[[Category: Schrader N]]
-
[[Category: Stoll, R]]
+
[[Category: Stoll R]]
-
[[Category: Vetter, I R]]
+
[[Category: Vetter IR]]
-
[[Category: Dna-binding]]
+
-
[[Category: Metal binding protein]]
+
-
[[Category: Metal-binding]]
+
-
[[Category: Mrna transport]]
+
-
[[Category: Nuclear pore complex]]
+
-
[[Category: Nucleus]]
+
-
[[Category: Phosphoprotein]]
+
-
[[Category: Protein transport]]
+
-
[[Category: Translocation]]
+
-
[[Category: Transport]]
+
-
[[Category: Zinc-finger]]
+

Current revision

Zinc-finger 2 of Nup153

PDB ID 2k0c

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools