6wi8
From Proteopedia
(Difference between revisions)
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==Inhibitor compound-induced confrontational change in Ring1b-Bmi1 domain structure== | ==Inhibitor compound-induced confrontational change in Ring1b-Bmi1 domain structure== | ||
- | <StructureSection load='6wi8' size='340' side='right'caption='[[6wi8]]' scene=''> | + | <StructureSection load='6wi8' size='340' side='right'caption='[[6wi8]], [[Resolution|resolution]] 3.09Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6WI8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6WI8 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6wi8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6WI8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6WI8 FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6wi8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6wi8 OCA], [https://pdbe.org/6wi8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6wi8 RCSB], [https://www.ebi.ac.uk/pdbsum/6wi8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6wi8 ProSAT]</span></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> |
+ | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BMI1, PCGF4, RNF51 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6wi8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6wi8 OCA], [https://pdbe.org/6wi8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6wi8 RCSB], [https://www.ebi.ac.uk/pdbsum/6wi8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6wi8 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Polycomb repressive complex 1 (PRC1) is an essential chromatin-modifying complex that monoubiquitinates histone H2A and is involved in maintaining the repressed chromatin state. Emerging evidence suggests PRC1 activity in various cancers, rationalizing the need for small-molecule inhibitors with well-defined mechanisms of action. Here, we describe the development of compounds that directly bind to RING1B-BMI1, the heterodimeric complex constituting the E3 ligase activity of PRC1. These compounds block the association of RING1B-BMI1 with chromatin and inhibit H2A ubiquitination. Structural studies demonstrate that these inhibitors bind to RING1B by inducing the formation of a hydrophobic pocket in the RING domain. Our PRC1 inhibitor, RB-3, decreases the global level of H2A ubiquitination and induces differentiation in leukemia cell lines and primary acute myeloid leukemia (AML) samples. In summary, we demonstrate that targeting the PRC1 RING domain with small molecules is feasible, and RB-3 represents a valuable chemical tool to study PRC1 biology. | ||
+ | |||
+ | Small-molecule inhibitors targeting Polycomb repressive complex 1 RING domain.,Shukla S, Ying W, Gray F, Yao Y, Simes ML, Zhao Q, Miao H, Cho HJ, Gonzalez-Alonso P, Winkler A, Lund G, Purohit T, Kim E, Zhang X, Ray JM, He S, Nikolaidis C, Ndoj J, Wang J, Jaremko L, Jaremko M, Ryan RJH, Guzman ML, Grembecka J, Cierpicki T Nat Chem Biol. 2021 Jul;17(7):784-793. doi: 10.1038/s41589-021-00815-5. Epub 2021, Jun 21. PMID:34155404<ref>PMID:34155404</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 6wi8" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
+ | [[Category: Human]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Cho | + | [[Category: Cho, H J]] |
- | [[Category: Cierpicki T]] | + | [[Category: Cierpicki, T]] |
+ | [[Category: Bmi1]] | ||
+ | [[Category: E3 ubiquitin ligase ring1b]] | ||
+ | [[Category: Ligase]] |
Revision as of 15:48, 27 October 2021
Inhibitor compound-induced confrontational change in Ring1b-Bmi1 domain structure
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