2l0i

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Current revision (01:09, 21 November 2024) (edit) (undo)
 
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==Solution structure of Rtt103 CTD-interacting domain bound to a Ser2 phosphorylated CTD peptide==
==Solution structure of Rtt103 CTD-interacting domain bound to a Ser2 phosphorylated CTD peptide==
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<StructureSection load='2l0i' size='340' side='right'caption='[[2l0i]], [[NMR_Ensembles_of_Models | 10 NMR models]]' scene=''>
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<StructureSection load='2l0i' size='340' side='right'caption='[[2l0i]]' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2l0i]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_18824 Atcc 18824]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2L0I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2L0I FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2l0i]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2L0I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2L0I FirstGlance]. <br>
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</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=SEP:PHOSPHOSERINE'>SEP</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 10 models</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2km4|2km4]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SEP:PHOSPHOSERINE'>SEP</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RTT103, YDR289C ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 ATCC 18824])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2l0i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2l0i OCA], [https://pdbe.org/2l0i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2l0i RCSB], [https://www.ebi.ac.uk/pdbsum/2l0i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2l0i ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2l0i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2l0i OCA], [https://pdbe.org/2l0i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2l0i RCSB], [https://www.ebi.ac.uk/pdbsum/2l0i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2l0i ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
 
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[[https://www.uniprot.org/uniprot/RT103_YEAST RT103_YEAST]] Involved in transcription termination by RNA polymerase II and in regulation of Ty1 transposition.<ref>PMID:11779788</ref> <ref>PMID:15565157</ref>
 
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/l0/2l0i_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/l0/2l0i_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Atcc 18824]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Buratowski, S]]
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[[Category: Saccharomyces cerevisiae]]
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[[Category: Kim, M]]
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[[Category: Buratowski S]]
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[[Category: Leeper, T C]]
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[[Category: Kim M]]
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[[Category: Lunde, B M]]
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[[Category: Leeper TC]]
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[[Category: Meinhart, A]]
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[[Category: Lunde BM]]
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[[Category: Mutschler, H]]
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[[Category: Meinhart A]]
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[[Category: Reichow, S L]]
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[[Category: Mutschler H]]
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[[Category: Suh, H]]
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[[Category: Reichow SL]]
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[[Category: Varani, G]]
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[[Category: Suh H]]
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[[Category: Yang, F]]
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[[Category: Varani G]]
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[[Category: 3' end processing]]
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[[Category: Yang F]]
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[[Category: Transcription]]
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Current revision

Solution structure of Rtt103 CTD-interacting domain bound to a Ser2 phosphorylated CTD peptide

PDB ID 2l0i

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