7bhu

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Crystal structure of MAT2a with elaborated fragment 26 bound in the allosteric site==
==Crystal structure of MAT2a with elaborated fragment 26 bound in the allosteric site==
-
<StructureSection load='7bhu' size='340' side='right'caption='[[7bhu]]' scene=''>
+
<StructureSection load='7bhu' size='340' side='right'caption='[[7bhu]], [[Resolution|resolution]] 1.15&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7BHU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7BHU FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[7bhu]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7BHU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7BHU FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7bhu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7bhu OCA], [https://pdbe.org/7bhu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7bhu RCSB], [https://www.ebi.ac.uk/pdbsum/7bhu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7bhu ProSAT]</span></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene>, <scene name='pdbligand=TOW:7-chloranyl-4-(dimethylamino)-1-(2-hydroxyethyl)quinazolin-2-one'>TOW</scene></td></tr>
 +
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Methionine_adenosyltransferase Methionine adenosyltransferase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.6 2.5.1.6] </span></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7bhu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7bhu OCA], [https://pdbe.org/7bhu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7bhu RCSB], [https://www.ebi.ac.uk/pdbsum/7bhu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7bhu ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[[https://www.uniprot.org/uniprot/METK2_HUMAN METK2_HUMAN]] Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
MAT2a is a methionine adenosyltransferase that synthesizes the essential metabolite S-adenosylmethionine (SAM) from methionine and ATP. Tumors bearing the co-deletion of p16 and MTAP genes have been shown to be sensitive to MAT2a inhibition, making it an attractive target for treatment of MTAP-deleted cancers. A fragment-based lead generation campaign identified weak but efficient hits binding in a known allosteric site. By use of structure-guided design and systematic SAR exploration, the hits were elaborated through a merging and growing strategy into an arylquinazolinone series of potent MAT2a inhibitors. The selected in vivo tool compound 28 reduced SAM-dependent methylation events in cells and inhibited proliferation of MTAP-null cells in vitro. In vivo studies showed that 28 was able to induce antitumor response in an MTAP knockout HCT116 xenograft model.
 +
 +
Fragment-Based Design of a Potent MAT2a Inhibitor and in Vivo Evaluation in an MTAP Null Xenograft Model.,De Fusco C, Schimpl M, Borjesson U, Cheung T, Collie I, Evans L, Narasimhan P, Stubbs C, Vazquez-Chantada M, Wagner DJ, Grondine M, Sanders MG, Tentarelli S, Underwood E, Argyrou A, Smith JM, Lynch JT, Chiarparin E, Robb G, Bagal SK, Scott JS J Med Chem. 2021 Apr 26. doi: 10.1021/acs.jmedchem.1c00067. PMID:33900758<ref>PMID:33900758</ref>
 +
 +
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 7bhu" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Argyrou A]]
+
[[Category: Methionine adenosyltransferase]]
-
[[Category: Bagal S]]
+
[[Category: Argyrou, A]]
-
[[Category: Borjesson U]]
+
[[Category: Bagal, S]]
-
[[Category: Cheung T]]
+
[[Category: Borjesson, U]]
-
[[Category: Chiarparin E]]
+
[[Category: Cheung, T]]
-
[[Category: Collie I]]
+
[[Category: Chiarparin, E]]
-
[[Category: De Fusco C]]
+
[[Category: Collie, I]]
-
[[Category: Evans L]]
+
[[Category: Evans, L]]
-
[[Category: Grondine M]]
+
[[Category: Fusco, C De]]
-
[[Category: Narasimhan P]]
+
[[Category: Grondine, M]]
-
[[Category: Robb G]]
+
[[Category: Narasimhan, P]]
-
[[Category: Schimpl M]]
+
[[Category: Robb, G]]
-
[[Category: Scott JS]]
+
[[Category: Schimpl, M]]
-
[[Category: Stubbs C]]
+
[[Category: Scott, J S]]
-
[[Category: Tentarelli S]]
+
[[Category: Stubbs, C]]
-
[[Category: Underwood E]]
+
[[Category: Tentarelli, S]]
-
[[Category: Vazquez-Chantada M]]
+
[[Category: Underwood, E]]
-
[[Category: Wagner DJ]]
+
[[Category: Vazquez-Chantada, M]]
 +
[[Category: Wagner, D J]]
 +
[[Category: Allosteric inhibitor]]
 +
[[Category: Fragment-based drug design]]
 +
[[Category: Oncology]]
 +
[[Category: Synthetic lethal therapy]]
 +
[[Category: Transferase]]

Revision as of 09:08, 5 May 2021

Crystal structure of MAT2a with elaborated fragment 26 bound in the allosteric site

PDB ID 7bhu

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools