7lgb
From Proteopedia
(Difference between revisions)
Line 1: | Line 1: | ||
==ChsB1 in complex with NAD+== | ==ChsB1 in complex with NAD+== | ||
- | <StructureSection load='7lgb' size='340' side='right'caption='[[7lgb]]' scene=''> | + | <StructureSection load='7lgb' size='340' side='right'caption='[[7lgb]], [[Resolution|resolution]] 2.21Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7LGB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7LGB FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7lgb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_tuberculosis"_(zopf_1883)_klein_1884 "bacillus tuberculosis" (zopf 1883) klein 1884]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7LGB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7LGB FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7lgb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7lgb OCA], [https://pdbe.org/7lgb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7lgb RCSB], [https://www.ebi.ac.uk/pdbsum/7lgb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7lgb ProSAT]</span></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr> |
+ | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">fabG_8, fabG_1, fabG_2, fabG_4, fabG_6, fabG_7, DSI38_08445, E5M52_16205, ERS007665_00489, ERS007670_00458, ERS007679_00994, ERS007681_00640, ERS007741_01258, ERS013471_03025, ERS023446_03243, ERS024276_00059, ERS075361_03673, F6W99_02176, FRD82_16680, SAMEA2683035_03264 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1773 "Bacillus tuberculosis" (Zopf 1883) Klein 1884])</td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7lgb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7lgb OCA], [https://pdbe.org/7lgb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7lgb RCSB], [https://www.ebi.ac.uk/pdbsum/7lgb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7lgb ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | The unique ability of Mycobacterium tuberculosis (Mtb) to utilize host lipids such as cholesterol for survival, persistence, and virulence has made the metabolic pathway of cholesterol an area of great interest for therapeutics development. Herein, we identify and characterize two genes from the Cho-region (genomic locus responsible for cholesterol catabolism) of the Mtb genome, chsH3 (Rv3538) and chsB1 (Rv3502c). Their protein products catalyze two sequential stereospecific hydration and dehydrogenation steps in the beta-oxidation of the cholesterol side chain. ChsH3 favors the 22S hydration of 3-oxo-cholest-4,22-dien-24-oyl-CoA in contrast to the previously reported EchA19 (Rv3516), which catalyzes formation of the (22R)-hydroxy-3-oxo-cholest-4-en-24-oyl-CoA from the same enoyl-CoA substrate. ChsB1 is stereospecific and catalyzes dehydrogenation of the ChsH3 product but not the EchA19 product. The X-ray crystallographic structure of the ChsB1 apo-protein was determined at a resolution of 2.03 A, and the holo-enzyme with bound NAD(+) cofactor was determined at a resolution of 2.21 A. The homodimeric structure is representative of a classical NAD(+)-utilizing short-chain type alcohol dehydrogenase/reductase, including a Rossmann-fold motif, but exhibits a unique substrate binding site architecture that is of greater length and width than its homologous counterparts, likely to accommodate the bulky steroid substrate. Intriguingly, Mtb utilizes hydratases from the MaoC-like family in sterol side-chain catabolism in contrast to fatty acid beta-oxidation in other species that utilize the evolutionarily distinct crotonase family of hydratases. | ||
+ | |||
+ | Enzymatic beta-Oxidation of the Cholesterol Side Chain in Mycobacterium tuberculosis Bifurcates Stereospecifically at Hydration of 3-Oxo-cholest-4,22-dien-24-oyl-CoA.,Yuan T, Werman JM, Yin X, Yang M, Garcia-Diaz M, Sampson NS ACS Infect Dis. 2021 Apr 7. doi: 10.1021/acsinfecdis.1c00069. PMID:33826843<ref>PMID:33826843</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 7lgb" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Garcia-Diaz M]] | + | [[Category: Garcia-Diaz, M]] |
- | [[Category: Sampson | + | [[Category: Sampson, N S]] |
- | [[Category: Werman | + | [[Category: Werman, J M]] |
- | [[Category: Yang M]] | + | [[Category: Yang, M]] |
- | [[Category: Yin X]] | + | [[Category: Yin, X]] |
- | [[Category: Yuan T]] | + | [[Category: Yuan, T]] |
+ | [[Category: Oxidoreductase]] | ||
+ | [[Category: Short-chain type alcohol dehydrogenase/reductase hydroxyacyl-coa dehydrogenase]] |
Revision as of 07:49, 25 June 2021
ChsB1 in complex with NAD+
|