User:Megan Fleshman/Sandbox1

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===Dimer-Dimer Interface===
===Dimer-Dimer Interface===
The <scene name='87/877604/Dimer_interface/19'>dimer-dimer interface</scene> is mobile and mostly hydrophobic, and the residues interact in a shape-complementary manner <ref name="Guan">PMID:32424158</ref>. It was also found that the reaction chamber is shielded by a lid from the cytosolic side, which leads to low catalytic activity. The binding of Acyl-CoA and cholesterol induce conformational changes that activate the tunnels necessary for substrates to enter them. Work is still being done to fully determine the mechanism of this reaction, but this is the proposed pathway <ref name="Qian">PMID:32433614</ref>.
The <scene name='87/877604/Dimer_interface/19'>dimer-dimer interface</scene> is mobile and mostly hydrophobic, and the residues interact in a shape-complementary manner <ref name="Guan">PMID:32424158</ref>. It was also found that the reaction chamber is shielded by a lid from the cytosolic side, which leads to low catalytic activity. The binding of Acyl-CoA and cholesterol induce conformational changes that activate the tunnels necessary for substrates to enter them. Work is still being done to fully determine the mechanism of this reaction, but this is the proposed pathway <ref name="Qian">PMID:32433614</ref>.
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==Mechanism==
==Mechanism==
The mechanism of the acyltransferase reaction occurs in the catalytic site of each monomer in the dimer of ACAT1. The T tunnel and and C tunnel converge to the same space to allow the proper orientation of the Acyl CoA and the incoming cholesterol from the transmembrane. The Acyl CoA is oriented in a way to allow the His460 to act as a base catalyst to begin the reaction by deprotonation of the cholesterol which allows it to attack the carbonyl carbon which breaks the sulfur carbonyl bond (Figure 4). The His460 is positioned to deprotonate the cholesterol upon entering through the T tunnel: Acyl-CoA upon entering is positioned to where the sulfur bonded to the carboxyl carbon is at the direct intersection of the T tunnel into the active site. The Acyl CoA is held in place by the <scene name='87/877605/Catalytic_residues/9'>oxyanion hole</scene> of Asn421. This mechanism produces Acyl-CoASH and cholesteryl ester. The Acyl-CoASH leaves through the C tunnel to the cytosol. <ref name="Qian">PMID:32433614</ref>
The mechanism of the acyltransferase reaction occurs in the catalytic site of each monomer in the dimer of ACAT1. The T tunnel and and C tunnel converge to the same space to allow the proper orientation of the Acyl CoA and the incoming cholesterol from the transmembrane. The Acyl CoA is oriented in a way to allow the His460 to act as a base catalyst to begin the reaction by deprotonation of the cholesterol which allows it to attack the carbonyl carbon which breaks the sulfur carbonyl bond (Figure 4). The His460 is positioned to deprotonate the cholesterol upon entering through the T tunnel: Acyl-CoA upon entering is positioned to where the sulfur bonded to the carboxyl carbon is at the direct intersection of the T tunnel into the active site. The Acyl CoA is held in place by the <scene name='87/877605/Catalytic_residues/9'>oxyanion hole</scene> of Asn421. This mechanism produces Acyl-CoASH and cholesteryl ester. The Acyl-CoASH leaves through the C tunnel to the cytosol. <ref name="Qian">PMID:32433614</ref>
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Current revision

Acyl-Coenzyme A: Cholesterol Acetyltransferase 1 (ACAT1): Function, Structure, and Inhibition

ACAT

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References

  1. 1.0 1.1 1.2 1.3 1.4 1.5 Qian H, Zhao X, Yan R, Yao X, Gao S, Sun X, Du X, Yang H, Wong CCL, Yan N. Structural basis for catalysis and substrate specificity of human ACAT1. Nature. 2020 May;581(7808):333-338. doi: 10.1038/s41586-020-2290-0. Epub 2020 May, 13. PMID:32433614 doi:http://dx.doi.org/10.1038/s41586-020-2290-0
  2. Farese RV Jr. The nine lives of ACAT inhibitors. Arterioscler Thromb Vasc Biol. 2006 Aug;26(8):1684-6. doi:, 10.1161/01.ATV.0000227511.35456.90. PMID:16857957 doi:http://dx.doi.org/10.1161/01.ATV.0000227511.35456.90
  3. 3.0 3.1 3.2 3.3 3.4 Guan C, Niu Y, Chen SC, Kang Y, Wu JX, Nishi K, Chang CCY, Chang TY, Luo T, Chen L. Structural insights into the inhibition mechanism of human sterol O-acyltransferase 1 by a competitive inhibitor. Nat Commun. 2020 May 18;11(1):2478. doi: 10.1038/s41467-020-16288-4. PMID:32424158 doi:http://dx.doi.org/10.1038/s41467-020-16288-4
  4. Ayyagari VN, Wang X, Diaz-Sylvester PL, Groesch K, Brard L. Assessment of acyl-CoA cholesterol acyltransferase (ACAT-1) role in ovarian cancer progression-An in vitro study. PLoS One. 2020 Jan 24;15(1):e0228024. doi: 10.1371/journal.pone.0228024., eCollection 2020. PMID:31978092 doi:http://dx.doi.org/10.1371/journal.pone.0228024
  5. Vaziri ND, Liang KH. Acyl-coenzyme A:cholesterol acyltransferase inhibition ameliorates proteinuria, hyperlipidemia, lecithin-cholesterol acyltransferase, SRB-1, and low-denisty lipoprotein receptor deficiencies in nephrotic syndrome. Circulation. 2004 Jul 27;110(4):419-25. doi: 10.1161/01.CIR.0000136023.70841.0F. , Epub 2004 Jul 19. PMID:15262831 doi:http://dx.doi.org/10.1161/01.CIR.0000136023.70841.0F
  6. Willner EL, Tow B, Buhman KK, Wilson M, Sanan DA, Rudel LL, Farese RV Jr. Deficiency of acyl CoA:cholesterol acyltransferase 2 prevents atherosclerosis in apolipoprotein E-deficient mice. Proc Natl Acad Sci U S A. 2003 Feb 4;100(3):1262-7. doi: 10.1073/pnas.0336398100., Epub 2003 Jan 21. PMID:12538880 doi:http://dx.doi.org/10.1073/pnas.0336398100
  7. 7.0 7.1 7.2 7.3 Chang TY, Chang CC, Bryleva E, Rogers MA, Murphy SR. Neuronal cholesterol esterification by ACAT1 in Alzheimer's disease. IUBMB Life. 2010 Apr;62(4):261-7. doi: 10.1002/iub.305. PMID:20101629 doi:http://dx.doi.org/10.1002/iub.305
  8. 8.0 8.1 Shibuya Y, Chang CC, Chang TY. ACAT1/SOAT1 as a therapeutic target for Alzheimer's disease. Future Med Chem. 2015;7(18):2451-67. doi: 10.4155/fmc.15.161. Epub 2015 Dec 15. PMID:26669800 doi:http://dx.doi.org/10.4155/fmc.15.161

Student Contributors

  • Megan Fleshman, Tori Templin, Haylie Moehlenkamp

Proteopedia Page Contributors and Editors (what is this?)

Megan Fleshman

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