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1hbz

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<StructureSection load='1hbz' size='340' side='right'caption='[[1hbz]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
<StructureSection load='1hbz' size='340' side='right'caption='[[1hbz]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[1hbz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Micrococcus_lysodeikticus Micrococcus lysodeikticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1HBZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1HBZ FirstGlance]. <br>
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<table><tr><td colspan='2'>[[1hbz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Micrococcus_luteus Micrococcus luteus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1HBZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1HBZ FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Catalase Catalase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.6 1.11.1.6] </span></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1hbz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1hbz OCA], [https://pdbe.org/1hbz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1hbz RCSB], [https://www.ebi.ac.uk/pdbsum/1hbz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1hbz ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1hbz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1hbz OCA], [https://pdbe.org/1hbz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1hbz RCSB], [https://www.ebi.ac.uk/pdbsum/1hbz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1hbz ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/CATA_MICLU CATA_MICLU] Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1hbz ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1hbz ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
 
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== Publication Abstract from PubMed ==
 
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The three-dimensional crystal structure of catalase from Micrococcus lysodeikticus has been solved by multiple isomorphous replacement and refined at 1.5 A resolution. The subunit of the tetrameric molecule of 222 symmetry consists of a single polypeptide chain of about 500 amino acid residues and one haem group. The crystals belong to space group P4(2)2(1)2 with unit cell parameters a = b = 106.7 A, c = 106.3 A, and there is one subunit of the tetramer per asymmetric unit. The amino acid sequence has been tentatively determined by computer graphics model building and comparison with the known three-dimensional structure of beef liver catalase and sequences of several other catalases. The atomic model has been refined by Hendrickson and Konnert's least-squares minimisation against 94,315 reflections between 8 A and 1.5 A. The final model consists of 3,977 non-hydrogen atoms of the protein and haem group, 426 water molecules and one sulphate ion. The secondary and tertiary structures of the bacterial catalase have been analyzed and a comparison with the structure of beef liver catalase has been made.
 
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Three-dimensional structure of catalase from Micrococcus lysodeikticus at 1.5 A resolution.,Murshudov GN, Melik-Adamyan WR, Grebenko AI, Barynin VV, Vagin AA, Vainshtein BK, Dauter Z, Wilson KS FEBS Lett. 1992 Nov 9;312(2-3):127-31. PMID:1426241<ref>PMID:1426241</ref>
 
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
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</div>
 
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<div class="pdbe-citations 1hbz" style="background-color:#fffaf0;"></div>
 
==See Also==
==See Also==
*[[Catalase 3D structures|Catalase 3D structures]]
*[[Catalase 3D structures|Catalase 3D structures]]
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== References ==
 
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<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Catalase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Micrococcus lysodeikticus]]
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[[Category: Micrococcus luteus]]
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[[Category: Barynin, V V]]
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[[Category: Barynin VV]]
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[[Category: Braningen, J]]
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[[Category: Braningen J]]
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[[Category: Dauter, Z]]
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[[Category: Dauter Z]]
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[[Category: Grebenko, A I]]
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[[Category: Grebenko AI]]
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[[Category: Melik-Adamyan, W R]]
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[[Category: Melik-Adamyan WR]]
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[[Category: Murshudov, G N]]
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[[Category: Murshudov GN]]
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[[Category: Wilson, K S]]
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[[Category: Wilson KS]]
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[[Category: Heme hydrogen peroxide]]
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[[Category: Iron]]
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[[Category: Oxidoreductase]]
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[[Category: Peroxidase]]
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Revision as of 11:30, 27 March 2024

Catalase from Micrococcus lysodeikticu

PDB ID 1hbz

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