2ntg

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Current revision (10:20, 30 August 2023) (edit) (undo)
 
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<StructureSection load='2ntg' size='340' side='right'caption='[[2ntg]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
<StructureSection load='2ntg' size='340' side='right'caption='[[2ntg]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2ntg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bpt4 Bpt4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NTG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NTG FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2ntg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_T4 Escherichia virus T4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NTG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NTG FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene>, <scene name='pdbligand=R7A:S-[(4-BROMO-1-OXYL-2,2,5,5-TETRAMETHYL-2,5-DIHYDRO-1H-PYRROL-3-YL)METHYL]+METHANESULFONOTHIOATE'>R7A</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2nth|2nth]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene>, <scene name='pdbligand=R7A:S-[(4-BROMO-1-OXYL-2,2,5,5-TETRAMETHYL-2,5-DIHYDRO-1H-PYRROL-3-YL)METHYL]+METHANESULFONOTHIOATE'>R7A</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">E ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10665 BPT4])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ntg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ntg OCA], [https://pdbe.org/2ntg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ntg RCSB], [https://www.ebi.ac.uk/pdbsum/2ntg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ntg ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ntg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ntg OCA], [https://pdbe.org/2ntg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ntg RCSB], [https://www.ebi.ac.uk/pdbsum/2ntg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ntg ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/LYS_BPT4 LYS_BPT4]] Helps to release the mature phage particles from the cell wall by breaking down the peptidoglycan.
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[https://www.uniprot.org/uniprot/ENLYS_BPT4 ENLYS_BPT4] Endolysin with lysozyme activity that degrades host peptidoglycans and participates with the holin and spanin proteins in the sequential events which lead to the programmed host cell lysis releasing the mature viral particles. Once the holin has permeabilized the host cell membrane, the endolysin can reach the periplasm and break down the peptidoglycan layer.<ref>PMID:22389108</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Bpt4]]
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[[Category: Escherichia virus T4]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Lysozyme]]
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[[Category: Cascio D]]
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[[Category: Cascio, D]]
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[[Category: Guo Z]]
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[[Category: Guo, Z]]
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[[Category: Hideg K]]
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[[Category: Hideg, K]]
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[[Category: Hubbell WL]]
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[[Category: Hubbell, W L]]
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[[Category: Electron paramagnetic resonance]]
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[[Category: Epr]]
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[[Category: Hydrolase]]
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[[Category: Nitroxide]]
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[[Category: Spin label]]
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[[Category: T4 lysozyme]]
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Current revision

Structure of Spin-labeled T4 Lysozyme Mutant T115R7

PDB ID 2ntg

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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