2qai

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:32, 30 October 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='2qai' size='340' side='right'caption='[[2qai]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
<StructureSection load='2qai' size='340' side='right'caption='[[2qai]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2qai]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_43587 Atcc 43587]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QAI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QAI FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2qai]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QAI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QAI FirstGlance]. <br>
-
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2i4r|2i4r]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">atpF, PF0181 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2261 ATCC 43587])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/H(+)-transporting_two-sector_ATPase H(+)-transporting two-sector ATPase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.3.14 3.6.3.14] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qai FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qai OCA], [https://pdbe.org/2qai PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qai RCSB], [https://www.ebi.ac.uk/pdbsum/2qai PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qai ProSAT], [https://www.topsan.org/Proteins/NESGC/2qai TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qai FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qai OCA], [https://pdbe.org/2qai PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qai RCSB], [https://www.ebi.ac.uk/pdbsum/2qai PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qai ProSAT], [https://www.topsan.org/Proteins/NESGC/2qai TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/VATF_PYRFU VATF_PYRFU]] Produces ATP from ADP in the presence of a proton gradient across the membrane (By similarity).
+
[https://www.uniprot.org/uniprot/VATF_PYRFU VATF_PYRFU] Produces ATP from ADP in the presence of a proton gradient across the membrane (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 17: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qa/2qai_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qa/2qai_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 27: Line 25:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Atcc 43587]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Acton, T B]]
+
[[Category: Pyrococcus furiosus]]
-
[[Category: Fang, Y]]
+
[[Category: Acton TB]]
-
[[Category: Hunt, J F]]
+
[[Category: Fang Y]]
-
[[Category: Ma, L C]]
+
[[Category: Hunt JF]]
-
[[Category: Montelione, G T]]
+
[[Category: Ma L-C]]
-
[[Category: Structural genomic]]
+
[[Category: Montelione GT]]
-
[[Category: Seetharaman, J]]
+
[[Category: Seetharaman J]]
-
[[Category: Shih, L]]
+
[[Category: Shih L]]
-
[[Category: Su, M]]
+
[[Category: Su M]]
-
[[Category: Tong, L]]
+
[[Category: Tong L]]
-
[[Category: Vorobiev, S M]]
+
[[Category: Vorobiev SM]]
-
[[Category: Xiao, R]]
+
[[Category: Xiao R]]
-
[[Category: Atp synthase]]
+
-
[[Category: Atpf]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Nesg]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Subunit f]]
+
-
[[Category: Vatf_pyrfu]]
+

Current revision

Crystal structure of the V-type ATP synthase subunit F from Pyrococcus furiosus. NESG target PfR7.

PDB ID 2qai

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2qai"
Personal tools