2v5f

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:06, 13 December 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='2v5f' size='340' side='right'caption='[[2v5f]], [[Resolution|resolution]] 2.03&Aring;' scene=''>
<StructureSection load='2v5f' size='340' side='right'caption='[[2v5f]], [[Resolution|resolution]] 2.03&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2v5f]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V5F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2V5F FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2v5f]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V5F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2V5F FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1tjc|1tjc]]</div></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.03&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Procollagen-proline_dioxygenase Procollagen-proline dioxygenase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.14.11.2 1.14.11.2] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2v5f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v5f OCA], [https://pdbe.org/2v5f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2v5f RCSB], [https://www.ebi.ac.uk/pdbsum/2v5f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2v5f ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2v5f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v5f OCA], [https://pdbe.org/2v5f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2v5f RCSB], [https://www.ebi.ac.uk/pdbsum/2v5f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2v5f ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/P4HA1_HUMAN P4HA1_HUMAN]] Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in collagens and other proteins.
+
[https://www.uniprot.org/uniprot/P4HA1_HUMAN P4HA1_HUMAN] Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in collagens and other proteins.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 20: Line 19:
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2v5f ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2v5f ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
 +
 +
==See Also==
 +
*[[Hydroxylases 3D structures|Hydroxylases 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Procollagen-proline dioxygenase]]
+
[[Category: Synthetic construct]]
-
[[Category: Hieta, R]]
+
[[Category: Hieta R]]
-
[[Category: Kivirikko, K]]
+
[[Category: Kivirikko K]]
-
[[Category: Myllyharju, J]]
+
[[Category: Myllyharju J]]
-
[[Category: Pekkala, M]]
+
[[Category: Pekkala M]]
-
[[Category: Wierenga, R]]
+
[[Category: Wierenga R]]
-
[[Category: Endoplasmic reticulum]]
+
-
[[Category: Metal-binding]]
+
-
[[Category: Oxidoreductase]]
+

Current revision

Crystal structure of wild type peptide-binding domain of human type I collagen prolyl 4-hydroxylase.

PDB ID 2v5f

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools