2v8k

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:56, 9 May 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='2v8k' size='340' side='right'caption='[[2v8k]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
<StructureSection load='2v8k' size='340' side='right'caption='[[2v8k]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2v8k]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacterium_enterocoliticum"_schleifstein_and_coleman_1939 "bacterium enterocoliticum" schleifstein and coleman 1939]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V8K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2V8K FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2v8k]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_enterocolitica Yersinia enterocolitica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V8K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2V8K FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADA:ALPHA-D-GALACTOPYRANURONIC+ACID'>ADA</scene>, <scene name='pdbligand=GTR:BETA-D-GALACTOPYRANURONIC+ACID'>GTR</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2v8i|2v8i]], [[2v8j|2v8j]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADA:ALPHA-D-GALACTOPYRANURONIC+ACID'>ADA</scene>, <scene name='pdbligand=GTR:BETA-D-GALACTOPYRANURONIC+ACID'>GTR</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Pectate_lyase Pectate lyase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.2.2 4.2.2.2] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2v8k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v8k OCA], [https://pdbe.org/2v8k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2v8k RCSB], [https://www.ebi.ac.uk/pdbsum/2v8k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2v8k ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2v8k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v8k OCA], [https://pdbe.org/2v8k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2v8k RCSB], [https://www.ebi.ac.uk/pdbsum/2v8k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2v8k ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A1JSS8_YERE8 A1JSS8_YERE8]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 32: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacterium enterocoliticum schleifstein and coleman 1939]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Pectate lyase]]
+
[[Category: Yersinia enterocolitica]]
-
[[Category: Abbott, D W]]
+
[[Category: Abbott DW]]
-
[[Category: Boraston, A B]]
+
[[Category: Boraston AB]]
-
[[Category: Beta-elimination]]
+
-
[[Category: Lyase]]
+
-
[[Category: Pectin degradation]]
+

Current revision

Structure of a Family 2 Pectate Lyase in Complex with Trigalacturonic Acid

PDB ID 2v8k

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2v8k"
Personal tools