2vvy
From Proteopedia
(Difference between revisions)
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== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2vvy]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Vaccinia_virus Vaccinia virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VVY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VVY FirstGlance]. <br> | <table><tr><td colspan='2'>[[2vvy]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Vaccinia_virus Vaccinia virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VVY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VVY FirstGlance]. <br> | ||
- | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.693Å</td></tr> |
- | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vvy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vvy OCA], [https://pdbe.org/2vvy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vvy RCSB], [https://www.ebi.ac.uk/pdbsum/2vvy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vvy ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vvy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vvy OCA], [https://pdbe.org/2vvy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vvy RCSB], [https://www.ebi.ac.uk/pdbsum/2vvy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vvy ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/PG200_VACCW PG200_VACCW] Contributes to virulence by binding to the host IKBKB subunit of the IKK complex and preventing host NF-kappa-B activation in response to pro-inflammatory stimuli such as TNF-alpha or IL1B. Mechanistically, sterically hinders the direct contact between the kinase domains of IKBKB in the IKK complex containing IKBKB, CHUK/IKKA and NEMO (PubMed:29748387).<ref>PMID:21474453</ref> <ref>PMID:29748387</ref> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vv/2vvy_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vv/2vvy_consurf.spt"</scriptWhenChecked> | ||
- | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> |
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
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[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Vaccinia virus]] | [[Category: Vaccinia virus]] | ||
- | [[Category: Abrescia | + | [[Category: Abrescia NGA]] |
- | [[Category: Alderton | + | [[Category: Alderton D]] |
- | [[Category: Bahar | + | [[Category: Bahar MW]] |
- | [[Category: Chen | + | [[Category: Chen RA-J]] |
- | [[Category: Cooray | + | [[Category: Cooray S]] |
- | [[Category: Graham | + | [[Category: Graham SC]] |
- | [[Category: Grimes | + | [[Category: Grimes JM]] |
- | [[Category: Owens | + | [[Category: Owens RJ]] |
- | [[Category: Smith | + | [[Category: Smith GL]] |
- | [[Category: Stuart | + | [[Category: Stuart DI]] |
- | [[Category: Whalen | + | [[Category: Whalen DM]] |
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Current revision
Structure of Vaccinia virus protein B14
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Categories: Large Structures | Vaccinia virus | Abrescia NGA | Alderton D | Bahar MW | Chen RA-J | Cooray S | Graham SC | Grimes JM | Owens RJ | Smith GL | Stuart DI | Whalen DM