This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2wva

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:46, 15 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='2wva' size='340' side='right'caption='[[2wva]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
<StructureSection load='2wva' size='340' side='right'caption='[[2wva]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2wva]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/"achromobacter_anaerobium"_(sic)_shimwell_1937 "achromobacter anaerobium" (sic) shimwell 1937]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WVA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WVA FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2wva]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Zymomonas_mobilis Zymomonas mobilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WVA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WVA FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PYR:PYRUVIC+ACID'>PYR</scene>, <scene name='pdbligand=TPU:2-{1-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-5-METHYL-1H-1,2,3-TRIAZOL-4-YL}ETHYL+TRIHYDROGEN+DIPHOSPHATE'>TPU</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2wvh|2wvh]], [[2wvg|2wvg]], [[1zpd|1zpd]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PYR:PYRUVIC+ACID'>PYR</scene>, <scene name='pdbligand=TPU:2-{1-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-5-METHYL-1H-1,2,3-TRIAZOL-4-YL}ETHYL+TRIHYDROGEN+DIPHOSPHATE'>TPU</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Pyruvate_decarboxylase Pyruvate decarboxylase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.1 4.1.1.1] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wva FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wva OCA], [https://pdbe.org/2wva PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wva RCSB], [https://www.ebi.ac.uk/pdbsum/2wva PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wva ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wva FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wva OCA], [https://pdbe.org/2wva PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wva RCSB], [https://www.ebi.ac.uk/pdbsum/2wva PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wva ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PDC_ZYMMO PDC_ZYMMO]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 36: Line 37:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Pyruvate decarboxylase]]
+
[[Category: Zymomonas mobilis]]
-
[[Category: Erixon, K]]
+
[[Category: Erixon K]]
-
[[Category: Leeper, F J]]
+
[[Category: Leeper FJ]]
-
[[Category: Luisi, B F]]
+
[[Category: Luisi BF]]
-
[[Category: Pei, X Y]]
+
[[Category: Pei XY]]
-
[[Category: Alcohol fermentation]]
+
-
[[Category: Flavoprotein]]
+
-
[[Category: Lyase]]
+
-
[[Category: Metal-binding]]
+
-
[[Category: Thiamin diphosphate]]
+

Current revision

Structural insights into the pre-reaction state of pyruvate decarboxylase from Zymomonas mobilis

PDB ID 2wva

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2wva"
Personal tools