This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6zri

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Crystal structure of OXA-10loop24 in complex with meropenem==
==Crystal structure of OXA-10loop24 in complex with meropenem==
-
<StructureSection load='6zri' size='340' side='right'caption='[[6zri]]' scene=''>
+
<StructureSection load='6zri' size='340' side='right'caption='[[6zri]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ZRI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6ZRI FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6zri]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ZRI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6ZRI FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6zri FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6zri OCA], [https://pdbe.org/6zri PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6zri RCSB], [https://www.ebi.ac.uk/pdbsum/6zri PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6zri ProSAT]</span></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DWZ:(2S,3R,4S)-4-{[(3S,5S)-5-(DIMETHYLCARBAMOYL)PYRROLIDIN-3-YL]SULFANYL}-2-[(1S,2R)-1-FORMYL-2-HYDROXYPROPYL]-3-METHYL-3,4-DIHYDRO-2H-PYRROLE-5-CARBOXYLIC+ACID'>DWZ</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
 +
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=KCX:LYSINE+NZ-CARBOXYLIC+ACID'>KCX</scene></td></tr>
 +
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[6zrg|6zrg]], [[6zrh|6zrh]]</div></td></tr>
 +
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">blaoxa-10, blaOXA-10, oxa-10, BK373_28375, CQP61_30695, E4K55_27185, FORC82_p097, GII67_09965 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>
 +
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Beta-lactamase Beta-lactamase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.2.6 3.5.2.6] </span></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6zri FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6zri OCA], [https://pdbe.org/6zri PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6zri RCSB], [https://www.ebi.ac.uk/pdbsum/6zri PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6zri ProSAT]</span></td></tr>
</table>
</table>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Bacillus coli migula 1895]]
 +
[[Category: Beta-lactamase]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Benvenuti M]]
+
[[Category: Benvenuti, M]]
-
[[Category: De Luca F]]
+
[[Category: Docquier, J D]]
-
[[Category: Di Pisa F]]
+
[[Category: Luca, F De]]
-
[[Category: Docquier JD]]
+
[[Category: Mangani, S]]
-
[[Category: Mangani S]]
+
[[Category: Pisa, F Di]]
-
[[Category: Pozzi C]]
+
[[Category: Pozzi, C]]
-
[[Category: Tassone G]]
+
[[Category: Tassone, G]]
 +
[[Category: Acylenzyme]]
 +
[[Category: Carbapenem]]
 +
[[Category: Hydrolase]]
 +
[[Category: Laboratory variant]]
 +
[[Category: Meropenem]]
 +
[[Category: Oxa-10loop24]]

Revision as of 07:08, 2 February 2022

Crystal structure of OXA-10loop24 in complex with meropenem

PDB ID 6zri

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools