1dxi
From Proteopedia
(Difference between revisions)
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<StructureSection load='1dxi' size='340' side='right'caption='[[1dxi]], [[Resolution|resolution]] 2.60Å' scene=''> | <StructureSection load='1dxi' size='340' side='right'caption='[[1dxi]], [[Resolution|resolution]] 2.60Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1dxi]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[1dxi]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_murinus Streptomyces murinus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DXI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DXI FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> |
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dxi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dxi OCA], [https://pdbe.org/1dxi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dxi RCSB], [https://www.ebi.ac.uk/pdbsum/1dxi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dxi ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dxi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dxi OCA], [https://pdbe.org/1dxi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dxi RCSB], [https://www.ebi.ac.uk/pdbsum/1dxi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dxi ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
| - | + | [https://www.uniprot.org/uniprot/XYLA_STRMR XYLA_STRMR] Involved in D-xylose catabolism. | |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1dxi ConSurf]. | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1dxi ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
| - | <div style="background-color:#fffaf0;"> | ||
| - | == Publication Abstract from PubMed == | ||
| - | Glucose isomerase from Streptomyces murinus has been crystallized in space group P4(1)2(1)2, cell dimensions a = b = 137.65 and c = 132.20 A. One dimer of the tetrametric molecule is found per asymmetric unit. An initial structure solution was obtained by the molecular replacement method. The crystallographic refinement was performed using molecular dynamics techniques with X-ray restraints. The final crystallographic R value is 21.4% at 2.6 A resolution including 3023 non-H atoms, two metal ions and two water molecules per monomer. | ||
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| - | Structure determination of glucose isomerase from Streptomyces murinus at 2.6 A resolution.,Rasmussen H, la Cour T, Nyborg J, Schulein M Acta Crystallogr D Biol Crystallogr. 1994 Mar 1;50(Pt 2):124-31. PMID:15299450<ref>PMID:15299450</ref> | ||
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| - | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| - | </div> | ||
| - | <div class="pdbe-citations 1dxi" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[D-xylose isomerase|D-xylose isomerase]] | + | *[[D-xylose isomerase 3D structures|D-xylose isomerase 3D structures]] |
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| - | + | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Atcc 19788]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: | + | [[Category: Streptomyces murinus]] |
| - | [[Category: Cour | + | [[Category: La Cour T]] |
| - | [[Category: Nyborg | + | [[Category: Nyborg J]] |
| - | [[Category: Rasmussen | + | [[Category: Rasmussen H]] |
| - | [[Category: Schulein | + | [[Category: Schulein M]] |
Current revision
STRUCTURE DETERMINATION OF GLUCOSE ISOMERASE FROM STREPTOMYCES MURINUS AT 2.6 ANGSTROMS RESOLUTION
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