1g1k

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:21, 7 February 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='1g1k' size='340' side='right'caption='[[1g1k]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='1g1k' size='340' side='right'caption='[[1g1k]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1g1k]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_35319 Atcc 35319]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1G1K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1G1K FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1g1k]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Ruminiclostridium_cellulolyticum Ruminiclostridium cellulolyticum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1G1K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1G1K FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1aoh|1aoh]], [[1anu|1anu]]</div></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1g1k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1g1k OCA], [https://pdbe.org/1g1k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1g1k RCSB], [https://www.ebi.ac.uk/pdbsum/1g1k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1g1k ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1g1k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1g1k OCA], [https://pdbe.org/1g1k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1g1k RCSB], [https://www.ebi.ac.uk/pdbsum/1g1k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1g1k ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q45996_9FIRM Q45996_9FIRM]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 17: Line 19:
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1g1k ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1g1k ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
-
<div style="background-color:#fffaf0;">
 
-
== Publication Abstract from PubMed ==
 
-
In the assembly of the Clostridium cellulolyticum cellulosome, the multiple cohesin modules of the scaffolding protein CipC serve as receptors for cellulolytic enzymes which bear a dockerin module. The X-ray structure of a type I C. cellulolyticum cohesin module (Cc-cohesin) has been solved using molecular replacement, and refined at 2.0 A resolution. Despite a rather low sequence identity of 32 %, this module has a fold close to those of the two Clostridium thermocellum cohesin (Ct-cohesin) modules whose 3D structures have been determined previously. Cc-cohesin forms a dimer in the crystal, as do the two Ct-cohesins. We show here that the dimer exists in solution and that addition of dockerin-containing proteins dissociates the dimer. This suggests that the dimerization interface and the cohesin/dockerin interface may overlap. The nature of the overall surface and of the dimer interface of Cc-cohesin differ notably from those of the Ct-cohesin modules, being much less polar, and this may explain the species specificity observed in the cohesin/dockerin interaction of C. cellulolyticum and C. thermocellum. We have produced a topology model of a C. cellulolyticum dockerin and of a Cc-cohesin/dockerin complex using homology modeling and available biochemical data. Our model suggests that a special residue pair, already identified in dockerin sequences, is located at the center of the cohesin surface putatively interacting with the dockerin.
 
- 
-
Crystal structure of a cohesin module from Clostridium cellulolyticum: implications for dockerin recognition.,Spinelli S, Fierobe HP, Belaich A, Belaich JP, Henrissat B, Cambillau C J Mol Biol. 2000 Nov 24;304(2):189-200. PMID:11080455<ref>PMID:11080455</ref>
 
- 
-
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
-
</div>
 
-
<div class="pdbe-citations 1g1k" style="background-color:#fffaf0;"></div>
 
-
== References ==
 
-
<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Atcc 35319]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Belaich, A]]
+
[[Category: Ruminiclostridium cellulolyticum]]
-
[[Category: Belaich, J P]]
+
[[Category: Belaich A]]
-
[[Category: Cambillau, C]]
+
[[Category: Belaich J-P]]
-
[[Category: Fierobe, H P]]
+
[[Category: Cambillau C]]
-
[[Category: Henrissat, B]]
+
[[Category: Fierobe H-P]]
-
[[Category: Spinelli, S]]
+
[[Category: Henrissat B]]
-
[[Category: Beta -barrel]]
+
[[Category: Spinelli S]]
-
[[Category: Structural protein]]
+

Current revision

COHESIN MODULE FROM THE CELLULOSOME OF CLOSTRIDIUM CELLULOLYTICUM

PDB ID 1g1k

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools