This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1ivx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (23:37, 27 December 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='1ivx' size='340' side='right'caption='[[1ivx]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
<StructureSection load='1ivx' size='340' side='right'caption='[[1ivx]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1ivx]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"achromobacter_globiformis"_(conn_1928)_bergey_et_al._1930 "achromobacter globiformis" (conn 1928) bergey et al. 1930]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IVX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IVX FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1ivx]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arthrobacter_globiformis Arthrobacter globiformis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IVX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IVX FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=TPQ:5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE'>TPQ</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=TPQ:5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE'>TPQ</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1av4|1av4]], [[1avk|1avk]], [[1avl|1avl]], [[1iqx|1iqx]], [[1iqy|1iqy]], [[1iu7|1iu7]], [[1ivu|1ivu]], [[1ivv|1ivv]], [[1ivw|1ivw]]</div></td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Oxidoreductase Oxidoreductase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.4.3.21 and 1.4.3.22 1.4.3.21 and 1.4.3.22] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ivx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ivx OCA], [https://pdbe.org/1ivx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ivx RCSB], [https://www.ebi.ac.uk/pdbsum/1ivx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ivx ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ivx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ivx OCA], [https://pdbe.org/1ivx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ivx RCSB], [https://www.ebi.ac.uk/pdbsum/1ivx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ivx ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PAOX_ARTGO PAOX_ARTGO]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 36: Line 36:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Arthrobacter globiformis]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Oxidoreductase]]
+
[[Category: Kawamori A]]
-
[[Category: Kawamori, A]]
+
[[Category: Kim M]]
-
[[Category: Kim, M]]
+
[[Category: Kishishita S]]
-
[[Category: Kishishita, S]]
+
[[Category: Okajima T]]
-
[[Category: Okajima, T]]
+
[[Category: Tanizawa K]]
-
[[Category: Tanizawa, K]]
+
[[Category: Yamaguchi H]]
-
[[Category: Yamaguchi, H]]
+
[[Category: Yoshimura M]]
-
[[Category: Yoshimura, M]]
+
-
[[Category: Amine oxidase]]
+
-
[[Category: Biogenesis]]
+
-
[[Category: Copper]]
+
-
[[Category: Freeze-trapp]]
+
-
[[Category: Intermediate]]
+
-
[[Category: Quinone cofactor]]
+
-
[[Category: Tpq]]
+

Current revision

Crystal structure of copper amine oxidase from Arthrobacter globiformis: Holo form generated by biogenesis in crystal.

PDB ID 1ivx

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1ivx"
Personal tools